RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 ANAPC4Q9UJX5 808 aa4.05□□□□□ -1.76
NEDD4L-217ENST00000587246 ATP11BQ9Y2G3 1177 aa4.05□□□□□ -1.76
NEDD4L-217ENST00000587246 REXO2Q9Y3B8 237 aaKnown RBP4.05□□□□□ -1.76
NEDD4L-217ENST00000587246 IPPQ9Y573 584 aa4.05□□□□□ -1.76
NEDD4L-217ENST00000587246 HS3ST4Q9Y661 456 aa4.05□□□□□ -1.76
NEDD4L-217ENST00000587246 HS3ST3A1Q9Y663 406 aa4.05□□□□□ -1.76
NEDD4L-217ENST00000587246 FPGT-TNNI3KV9GXZ4 949 aa4.05□□□□□ -1.76
NEDD4L-217ENST00000587246 TNKSO95271 1327 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 PNPLA7Q6ZV29 1317 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 WDR33Q9C0J8 1336 aaKnown RBP4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 MARCH11A6NNE9 402 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 TCERG1O14776 1098 aaKnown RBP4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 CLGNO14967 610 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 SLC16A6O15403 523 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 HTRA2O43464 458 aaPredicted RBP4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 DTNBO60941 627 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 FAM20BO75063 409 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 RHOBTB3O94955 611 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 ABHD16AO95870 558 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 AMY1AP04745 511 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 FAM163BP0C2L3 166 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 RAP2AP10114 183 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 VDRP11473 427 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 MTHFD1P11586 935 aaKnown RBP4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 GCSHP23434 173 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 ALDH1A3P47895 512 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 INHBCP55103 352 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 TGFB2P61812 414 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 KCTD2Q14681 263 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 PPP2R5AQ15172 486 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 PTPAQ15257 358 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 PCBP2Q15366 365 aaKnown RBP eCLIP4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 CSRP2Q16527 193 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 BEAN1Q3B7T3 259 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 C10orf62Q5T681 223 aaPredicted RBP4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 RSPH3Q86UC2 560 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 SYT12Q8IV01 421 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 ARHGEF19Q8IW93 802 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 RHOT1Q8IXI2 618 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 FAM43AQ8N2R8 423 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 MIER2Q8N344 545 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 TTC30BQ8N4P2 665 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 PPM1NQ8N819 430 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 SVIPQ8NHG7 77 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 CCHCR1Q8TD31 782 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 RUNDC1Q96C34 613 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 SLC2A13Q96QE2 648 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 MED15Q96RN5 788 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 CAMKK2Q96RR4 588 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 RNPEPQ9H4A4 650 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 MMRN2Q9H8L6 949 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 ARNT2Q9HBZ2 717 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 TRPM5Q9NZQ8 1165 aa4.04□□□□□ -1.76
NEDD4L-217ENST00000587246 LEFTY2O00292 366 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 GOLIM4O00461 696 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 TBX3O15119 743 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 ANXA1P04083 346 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 CFIP05156 583 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 FTH1P19P0C7X4 201 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 AKAP5P24588 427 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 PCSK1P29120 753 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 NEK2P51955 445 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 CHN2P52757 468 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 TERF1P54274 439 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 RNASE9P60153 205 aaKnown RBP4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 KIF23Q02241 960 aaPredicted RBP4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 RAPGEF1Q13905 1077 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 SPDYE7PQ495Y7 208 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 METRNLQ641Q3 311 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 ZNF529Q6P280 563 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 KCNV1Q6PIU1 500 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 ZBTB46Q86UZ6 589 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 FITM2Q8N6M3 262 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 IL17RDQ8NFM7 739 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 OR2I1PQ8NGU4 316 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 NSUN6Q8TEA1 469 aaKnown RBP4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 NUP133Q8WUM0 1156 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 FUBP1Q96AE4 644 aaKnown RBP4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 CLIP3Q96DZ5 547 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 C11orf54Q9H0W9 315 aaPredicted RBP4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 SLC2A4RGQ9NR83 387 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 SIDT1Q9NXL6 827 aaKnown RBP4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 DKK2Q9UBU2 259 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 SLC23A1Q9UHI7 598 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 LZTS1Q9Y250 596 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 POLHQ9Y253 713 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 ACTL7AQ9Y615 435 aa4.03□□□□□ -1.76
NEDD4L-217ENST00000587246 DYTNA2CJ06 578 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 CCDC154A6NI56 674 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 TSPAN6O43657 245 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 RPS6KA4O75676 772 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 HAUS5O94927 633 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 MYL1P05976 194 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 CKBP12277 381 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 FXR1P51114 621 aaKnown RBP eCLIP4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 RAP2BP61225 183 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 FHL2Q14192 279 aa4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 NFE2Q16621 373 aaPredicted RBP4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 PABPC1LQ4VXU2 614 aaKnown RBP4.02□□□□□ -1.77
NEDD4L-217ENST00000587246 MED25Q71SY5 747 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms