RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 CST3P01034 146 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-208ENST00000586667 HLA-DRAP01903 254 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 TNNC2P02585 160 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 CA3P07451 260 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 BCAR1P56945 870 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 NCOA4Q13772 614 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 SARM1Q6SZW1 724 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 ANKRD36BP1Q96IX9 119 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 TMEM175Q9BSA9 504 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 VPS16Q9H269 839 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 APOBEC3GQ9HC16 384 aaKnown RBP13.58□□□□□ -0.24
DNMT1-208ENST00000586667 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
DNMT1-208ENST00000586667 PCDHA11Q9Y5I1 949 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-208ENST00000586667 PLXNA4Q9HCM2 1894 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 ATG2AQ2TAZ0 1938 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 GTPBP10A4D1E9 387 aaKnown RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 P4HA2O15460 535 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 TEX33O43247 280 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 XPOTO43592 962 aaKnown RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 STX10O60499 249 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 STAU1O95793 577 aaKnown RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 GALTP07902 379 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 RPL9P32969 192 aaKnown RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 PBX1P40424 430 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 PIK3CAP42336 1068 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 MYL6P60660 151 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 APBA1Q02410 837 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 RNASELQ05823 741 aaKnown RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 BIRC3Q13489 604 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 PTPN21Q16825 1174 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 PRPF38BQ5VTL8 546 aaKnown RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 CREBRFQ8IUR6 639 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 RNF168Q8IYW5 571 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 LRRC52Q8N7C0 313 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 COLGALT1Q8NBJ5 622 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 FBXL13Q8NEE6 735 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 UROC1Q96N76 676 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 ZBED2Q9BTP6 218 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 PI4K2AQ9BTU6 479 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 VRTNQ9H8Y1 702 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 SIX2Q9NPC8 291 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 GCNT4Q9P109 453 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 COLQQ9Y215 455 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 SIK3Q9Y2K2 1263 aa13.57□□□□□ -0.24
DNMT1-208ENST00000586667 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-208ENST00000586667 A0A1W2PPC1 479 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 NRP1O14786 923 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 N4BP1O75113 896 aaKnown RBP13.56□□□□□ -0.24
DNMT1-208ENST00000586667 LAG3P18627 525 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 KLK7P49862 253 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 TPM4P67936 248 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 KCNMA1Q12791 1236 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 NR1I3Q14994 352 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 SPOPLQ6IQ16 392 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 TRIM65Q6PJ69 517 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 KCNT2Q6UVM3 1135 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 LIMS2Q7Z4I7 341 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 FIBCD1Q8N539 461 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 HASPINQ8TF76 798 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 CACTINQ8WUQ7 758 aaKnown RBP13.56□□□□□ -0.24
DNMT1-208ENST00000586667 CRACR2AQ9BSW2 395 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 INTS2Q9H0H0 1204 aaKnown RBP13.56□□□□□ -0.24
DNMT1-208ENST00000586667 IFNKQ9P0W0 207 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 AJAP1Q9UKB5 411 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-208ENST00000586667 AGAP1Q9UPQ3 857 aa13.56□□□□□ -0.24
DNMT1-208ENST00000586667 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
DNMT1-208ENST00000586667 EPHB6O15197 1021 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 CDK11BP21127 795 aaKnown RBP13.55□□□□□ -0.24
DNMT1-208ENST00000586667 PON1P27169 355 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 ASPAP45381 313 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 OR1G1P47890 313 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 LILRA4P59901 499 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 NOP14P78316 857 aaKnown RBP13.55□□□□□ -0.24
DNMT1-208ENST00000586667 RBP5P82980 135 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 TAP1Q03518 808 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 ZNF699Q32M78 642 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 DDX27Q96GQ7 796 aaKnown RBP13.55□□□□□ -0.24
DNMT1-208ENST00000586667 HPDLQ96IR7 371 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 ERGIC2Q96RQ1 377 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 ARID3AQ99856 593 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 C17orf80Q9BSJ5 609 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 XPO4Q9C0E2 1151 aaKnown RBP13.55□□□□□ -0.24
DNMT1-208ENST00000586667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■■■ 38.5
DNMT1-208ENST00000586667 RAB20Q9NX57 234 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 NUB1Q9Y5A7 615 aa13.55□□□□□ -0.24
DNMT1-208ENST00000586667 SZT2Q5T011 3432 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-208ENST00000586667 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-208ENST00000586667 NT5C1B-RDH14C9J2C7 533 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 C5orf67F2Z3F1 127 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 I3L4J1 428 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 B3GAT3O94766 335 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 NOL4O94818 638 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 SERPINC1P01008 464 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 KRT19P08727 400 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 SLC9A1P19634 815 aa13.54□□□□□ -0.24
DNMT1-208ENST00000586667 DNAJB2P25686 324 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms