RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 IFIH1Q9BYX4 1025 aaKnown RBP10.96□□□□□ -0.65
APOC1-201ENST00000586638 MTIF3Q9H2K0 278 aaKnown RBP10.96□□□□□ -0.65
APOC1-201ENST00000586638 RPF1Q9H9Y2 349 aaKnown RBP10.96□□□□□ -0.65
APOC1-201ENST00000586638 IL23AQ9NPF7 189 aa10.96□□□□□ -0.65
APOC1-201ENST00000586638 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.65
APOC1-201ENST00000586638 THEGQ9P2T0 379 aa10.96□□□□□ -0.65
APOC1-201ENST00000586638 GTF2IRD1Q9UHL9 959 aa10.96□□□□□ -0.65
APOC1-201ENST00000586638 DNAI1Q9UI46 699 aa10.96□□□□□ -0.65
APOC1-201ENST00000586638 A0A087X0T9 212 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 FAM170AA1A519 330 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 LACTBL1A8MY62 500 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 FOXN3O00409 490 aaPredicted RBP10.95□□□□□ -0.66
APOC1-201ENST00000586638 PHACTR2O75167 634 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 IL18RAPO95256 599 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 LCA5LO95447 670 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 CD4P01730 458 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 TMEM191BP0C7N4 346 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 FAM228BP0C875 321 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 GNG11P61952 73 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 ETF1P62495 437 aaKnown RBP10.95□□□□□ -0.66
APOC1-201ENST00000586638 MRPS6P82932 125 aaKnown RBP10.95□□□□□ -0.66
APOC1-201ENST00000586638 TFAMQ00059 246 aaKnown RBP10.95□□□□□ -0.66
APOC1-201ENST00000586638 ADGRE1Q14246 886 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 SURF1Q15526 300 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 DCAF4L1Q3SXM0 396 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 SLC35F6Q8N357 371 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 LNX1Q8TBB1 728 aaPredicted RBP10.95□□□□□ -0.66
APOC1-201ENST00000586638 SLC20A1Q8WUM9 679 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 HERVK_113Q902F9 699 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 WDR24Q96S15 920 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 ARID3AQ99856 593 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 ADPGKQ9BRR6 497 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 IRX2Q9BZI1 471 aaPredicted RBP10.95□□□□□ -0.66
APOC1-201ENST00000586638 LACRTQ9GZZ8 138 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 SLC28A3Q9HAS3 691 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 APOBEC3GQ9HC16 384 aaKnown RBP10.95□□□□□ -0.66
APOC1-201ENST00000586638 GUCA1BQ9UMX6 200 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 PCDHA13Q9Y5I0 950 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 TRPV2Q9Y5S1 764 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 CDY2AQ9Y6F7 541 aa10.95□□□□□ -0.66
APOC1-201ENST00000586638 GRIN2DO15399 1336 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 DDX3XO00571 662 aaKnown RBP eCLIP10.94□□□□□ -0.661e-7■■■■■ 93.7
APOC1-201ENST00000586638 ZC3H11AO75152 810 aaKnown RBP eCLIP10.94□□□□□ -0.66
APOC1-201ENST00000586638 CABYRO75952 493 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 CALCAP01258 141 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 CLTAP09496 248 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 CTSHP09668 335 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 PLA2G5P39877 138 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 USP8P40818 1118 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 MAGEA1P43355 309 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 MFAP3P55082 362 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 NOP14P78316 857 aaKnown RBP10.94□□□□□ -0.66
APOC1-201ENST00000586638 NCOA4Q13772 614 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 SLC18A3Q16572 532 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 ZNF569Q5MCW4 686 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 CCDC122Q5T0U0 273 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 JADE1Q6IE81 842 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 TAF2Q6P1X5 1199 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 FAM228AQ86W67 206 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 DNAAF5Q86Y56 855 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 SHC3Q92529 594 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 ANKRD36BP1Q96IX9 119 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 PACSIN1Q9BY11 444 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 EIF2AQ9BY44 585 aaKnown RBP10.94□□□□□ -0.66
APOC1-201ENST00000586638 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
APOC1-201ENST00000586638 NKX2-4Q9H2Z4 354 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 NENFQ9UMX5 172 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 PIN4Q9Y237 131 aaKnown RBP10.94□□□□□ -0.66
APOC1-201ENST00000586638 MYH10P35580 1976 aa10.94□□□□□ -0.66
APOC1-201ENST00000586638 A0A1B0GUA9 196 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 MACROD2A1Z1Q3 448 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 M0QZ92 97 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 KIF5CO60282 957 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 B4GALT4O60513 344 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 TNNC2P02585 160 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 KRT5P13647 590 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 EIF4BP23588 611 aaKnown RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 HOXA11P31270 313 aaPredicted RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 GRM5P41594 1212 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 GUCY2FP51841 1108 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 CRYBB1P53674 252 aaPredicted RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 AP3M2P53677 418 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 CCL23P55773 120 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 MYL6P60660 151 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 CDC42EP1Q00587 391 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 ITGA7Q13683 1181 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 NOTUMQ6P988 496 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 SLC27A1Q6PCB7 646 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 SCARA5Q6ZMJ2 495 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 OTOP2Q7RTS6 562 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 TRAPPC11Q7Z392 1133 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 SERINC5Q86VE9 423 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 SLC43A3Q8NBI5 491 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 KIF18AQ8NI77 898 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 UHRF1Q96T88 793 aaPredicted RBP10.93□□□□□ -0.66
APOC1-201ENST00000586638 SYT11Q9BT88 431 aa10.93□□□□□ -0.66
APOC1-201ENST00000586638 APOL6Q9BWW8 343 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms