RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 C3orf58Q8NDZ4 430 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 ZNF560Q96MR9 790 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 GUCD1Q96NT3 240 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 MED15Q96RN5 788 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 POP1Q99575 1024 aaKnown RBP20.69■□□□□ 0.9
DDX39A-204ENST00000586558 HERC2P3Q9BVR0 1158 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 VN1R3Q9BXE9 311 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 SRRTQ9BXP5 876 aaKnown RBP20.69■□□□□ 0.9
DDX39A-204ENST00000586558 NGRNQ9NPE2 291 aaKnown RBP20.69■□□□□ 0.9
DDX39A-204ENST00000586558 R3HCC1Q9Y3T6 440 aaKnown RBP20.69■□□□□ 0.9
DDX39A-204ENST00000586558 ITGB3P05106 788 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 DNAJB1P25685 340 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 GTF2H1P32780 548 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 AARSP49588 968 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■■■■■ 30.9
DDX39A-204ENST00000586558 RBP5P82980 135 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 CAMK1Q14012 370 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 TPD52L1Q16890 204 aaPredicted RBP20.68■□□□□ 0.9
DDX39A-204ENST00000586558 USP41Q3LFD5 358 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 CCDC40Q4G0X9 1142 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 TIGD5Q53EQ6 642 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 CD300LGQ6UXG3 332 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 TRAPPC11Q7Z392 1133 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 HASPINQ8TF76 798 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 GPR62Q9BZJ7 368 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 NAT10Q9H0A0 1025 aaKnown RBP20.68■□□□□ 0.9
DDX39A-204ENST00000586558 ZBP1Q9H171 429 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 TRANK1O15050 2925 aa20.68■□□□□ 0.9
DDX39A-204ENST00000586558 FSCN2O14926 492 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 CTSAP10619 480 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 POLR2BP30876 1174 aaKnown RBP20.67■□□□□ 0.9
DDX39A-204ENST00000586558 TAF6P49848 677 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 MARSP56192 900 aaKnown RBP20.67■□□□□ 0.9
DDX39A-204ENST00000586558 DLG4P78352 724 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 ADGRE1Q14246 886 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.67■□□□□ 0.9
DDX39A-204ENST00000586558 TMC7Q7Z402 723 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 CXorf38Q8TB03 319 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 ENOX1Q8TC92 643 aaKnown RBP20.67■□□□□ 0.9
DDX39A-204ENST00000586558 SUSD3Q96L08 255 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 TCF25Q9BQ70 676 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 ENTPD7Q9NQZ7 604 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 SIX4Q9UIU6 781 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 AGAP1Q9UPQ3 857 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 SSX2IPQ9Y2D8 614 aa20.67■□□□□ 0.9
DDX39A-204ENST00000586558 ARHGEF37A1IGU5 675 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 SYCE3A1L190 88 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 PPEF2O14830 753 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 URODP06132 367 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 GLUD2P49448 558 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 LILRA4P59901 499 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 SMC1AQ14683 1233 aaKnown RBP20.66■□□□□ 0.9
DDX39A-204ENST00000586558 ZSCAN23Q3MJ62 389 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 SV2CQ496J9 727 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 C1orf220Q5T0J3 134 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 FAM171A1Q5VUB5 890 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 KIAA1841Q6NSI8 718 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 PDXDC1Q6P996 788 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 C11orf57Q6ZUT1 292 aaPredicted RBP20.66■□□□□ 0.9
DDX39A-204ENST00000586558 FAM114A1Q8IWE2 563 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 MYLIPQ8WY64 445 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 ZNF516Q92618 1163 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 PPP2R3CQ969Q6 453 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 THAP9Q9H5L6 903 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 CHST7Q9NS84 486 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 IRAK3Q9Y616 596 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 MTCH2Q9Y6C9 303 aa20.66■□□□□ 0.9
DDX39A-204ENST00000586558 PLXNA4Q9HCM2 1894 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 SYN3O14994 580 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 PHACTR2O75167 634 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 C4BPAP04003 597 aaKnown RBP20.65■□□□□ 0.9
DDX39A-204ENST00000586558 KRT19P08727 400 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 TRIM49P0CI25 452 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 TRIM49CP0CI26 452 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 FGFR3P22607 806 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 IGFBP4P22692 258 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 BRCC3P46736 316 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 ERVFC1P60507 584 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 DSG1Q02413 1049 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 MYO1EQ12965 1108 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 BIRC3Q13489 604 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 ZACNQ401N2 412 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 TCERG1LQ5VWI1 586 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 TDRD10Q5VZ19 366 aaKnown RBP20.65■□□□□ 0.9
DDX39A-204ENST00000586558 TMEM130Q8N3G9 435 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 MICAL1Q8TDZ2 1067 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 SLC35C1Q96A29 364 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 FAM84AQ96KN4 292 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 TTPALQ9BTX7 342 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 FUCA2Q9BTY2 467 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 DNAJC25Q9H1X3 360 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 TMEM8AQ9HCN3 771 aa20.65■□□□□ 0.9
DDX39A-204ENST00000586558 MRPL17Q9NRX2 175 aaKnown RBP20.65■□□□□ 0.9
DDX39A-204ENST00000586558 M0QZQ0 153 aa20.64■□□□□ 0.89
DDX39A-204ENST00000586558 FOSL2P15408 326 aa20.64■□□□□ 0.89
DDX39A-204ENST00000586558 IGFBP6P24592 240 aaPredicted RBP20.64■□□□□ 0.89
DDX39A-204ENST00000586558 ATICP31939 592 aa20.64■□□□□ 0.89
DDX39A-204ENST00000586558 MYL5Q02045 173 aa20.64■□□□□ 0.89
DDX39A-204ENST00000586558 CREMQ03060 361 aa20.64■□□□□ 0.89
DDX39A-204ENST00000586558 TRPC3Q13507 836 aa20.64■□□□□ 0.89
DDX39A-204ENST00000586558 PTPN14Q15678 1187 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms