RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 C9orf57Q5W0N0 161 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 DCLRE1AQ6PJP8 1040 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 DPH6Q7L8W6 267 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 CNGA4Q8IV77 575 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 OR5B17Q8NGF7 314 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 HPDLQ96IR7 371 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 ZMAT2Q96NC0 199 aaKnown RBP13.91□□□□□ -0.18
TRIM47-202ENST00000585333 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM47-202ENST00000585333 COLEC11Q9BWP8 271 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 NIF3L1Q9GZT8 377 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 TBC1D13Q9NVG8 400 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 CEP72Q9P209 647 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 DSEQ9UL01 958 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 AGAP1Q9UPQ3 857 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
TRIM47-202ENST00000585333 ANO9A1A5B4 782 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 UPP2O95045 317 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 GJB5O95377 273 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 POMCP01189 267 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 ALDH2P05091 517 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 FGFR1P11362 822 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 PON1P27169 355 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 PBX1P40424 430 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 MAGEA10P43363 369 aaPredicted RBP13.9□□□□□ -0.18
TRIM47-202ENST00000585333 ALDH7A1P49419 539 aaKnown RBP13.9□□□□□ -0.18
TRIM47-202ENST00000585333 NOP14P78316 857 aaKnown RBP13.9□□□□□ -0.18
TRIM47-202ENST00000585333 DSC1Q08554 894 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 BTG3Q14201 252 aaPredicted RBP13.9□□□□□ -0.18
TRIM47-202ENST00000585333 LMBRD2Q68DH5 695 aaPredicted RBP13.9□□□□□ -0.18
TRIM47-202ENST00000585333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRIM47-202ENST00000585333 GSTCDQ8NEC7 633 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 TAS1R2Q8TE23 839 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 RNPC3Q96LT9 517 aaKnown RBP13.9□□□□□ -0.18
TRIM47-202ENST00000585333 CASD1Q96PB1 797 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 SPAG5Q96R06 1193 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 RAD9AQ99638 391 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 LSM14BQ9BX40 385 aaKnown RBP13.9□□□□□ -0.18
TRIM47-202ENST00000585333 CYP3A43Q9HB55 503 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 SIK3Q9Y2K2 1263 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 TET1Q8NFU7 2136 aa13.9□□□□□ -0.18
TRIM47-202ENST00000585333 PTPRJQ12913 1337 aa13.9□□□□□ -0.19
TRIM47-202ENST00000585333 COL4A6Q14031 1691 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 PODXLO00592 558 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 PIRO00625 290 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 TEX33O43247 280 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 KIF4AO95239 1232 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 CCDC173Q0VFZ6 552 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
TRIM47-202ENST00000585333 C16orf59Q7L2K0 433 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 HERC6Q8IVU3 1022 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 PPM1KQ8N3J5 372 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 ZNF689Q96CS4 500 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-202ENST00000585333 CRACR2AQ9BSW2 395 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 OXCT2Q9BYC2 517 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-202ENST00000585333 UBE2OQ9C0C9 1292 aaKnown RBP13.89□□□□□ -0.19
TRIM47-202ENST00000585333 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-202ENST00000585333 ZNHIT6Q9NWK9 470 aaKnown RBP13.89□□□□□ -0.19
TRIM47-202ENST00000585333 GDAP2Q9NXN4 497 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 TUBGCP4Q9UGJ1 667 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 LUC7L2Q9Y383 392 aaKnown RBP13.89□□□□□ -0.19
TRIM47-202ENST00000585333 ANK1P16157 1881 aa13.89□□□□□ -0.19
TRIM47-202ENST00000585333 MEIS3P2A8K0S8 358 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 KPNA7A9QM74 516 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 MEFVO15553 781 aaPredicted RBP13.88□□□□□ -0.19
TRIM47-202ENST00000585333 TLL1O43897 1013 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 HUS1O60921 280 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 B3GAT3O94766 335 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 VNN1O95497 513 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 ODC1P11926 461 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 UCHL3P15374 230 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 BMP8BP34820 402 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 WNT7BP56706 349 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 BPIFB4P59827 614 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 MYL6P60660 151 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 DEFB103AP81534 67 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 HTRA4P83105 476 aaPredicted RBP13.88□□□□□ -0.19
TRIM47-202ENST00000585333 ZBED6P86452 979 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 BMS1Q14692 1282 aaKnown RBP13.88□□□□□ -0.19
TRIM47-202ENST00000585333 NAB2Q15742 525 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 UPP1Q16831 310 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 TCTN1Q2MV58 587 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 WDR72Q3MJ13 1102 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 KLHDC7AQ5VTJ3 777 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 PDXDC1Q6P996 788 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 TMC6Q7Z403 805 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 METTL23Q86XA0 190 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 COLGALT2Q8IYK4 626 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 TMEM86AQ8N2M4 240 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 FIBCD1Q8N539 461 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 C18orf25Q96B23 403 aaPredicted RBP13.88□□□□□ -0.19
TRIM47-202ENST00000585333 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 SAMD11Q96NU1 681 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 STK33Q9BYT3 514 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 FAN1Q9Y2M0 1017 aa13.88□□□□□ -0.19
TRIM47-202ENST00000585333 PCDHB12Q9Y5F1 795 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms