RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ZNF365Q70YC5 407 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NLRX1Q86UT6 975 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 KATNAL2Q8IYT4 538 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MCPH1Q8NEM0 835 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 BICD1Q96G01 975 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MLXIPLQ9NP71 852 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ARHGAP28Q9P2N2 729 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NAALADL1Q9UQQ1 740 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 EXTL3O43909 919 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 DGAT1O75907 488 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 GJB6O95452 261 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TAS2R40P59535 323 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MKRN3Q13064 507 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 DGKZQ13574 1117 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TBC1D1Q86TI0 1168 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TCP11Q8WWU5 503 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ATP6V0A1Q93050 837 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 OSBPL8Q9BZF1 889 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 KIAA1586Q9HCI6 787 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 XPNPEP1Q9NQW7 623 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 EURLQ9NYK6 297 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ARL2BPQ9Y2Y0 163 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ACTL7BQ9Y614 415 aa15.08■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ARID2Q68CP9 1835 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 HLA-DRAP01903 254 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 C4BPAP04003 597 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 EZRP15311 586 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 ACO1P21399 889 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 DSG3P32926 999 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 NCALDP61601 193 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 MAMLD1Q13495 774 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 ZNF268Q14587 947 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 STAT4Q14765 748 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 PSMD6Q15008 389 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 NBPF20Q3BBV1 942 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 LIN9Q5TKA1 542 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 XRRA1Q6P2D8 792 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 CRELD2Q6UXH1 353 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 TRIM72Q6ZMU5 477 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 ARHGEF18Q6ZSZ5 1173 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 SPATA21Q7Z572 469 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 VSIG10LQ86VR7 867 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 EXD1Q8NHP7 514 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 GPRASP2Q96D09 838 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 VCPIP1Q96JH7 1222 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 MRPL47Q9HD33 250 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 PRKAG3Q9UGI9 489 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 BAIAP2L1Q9UHR4 511 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 GGT7Q9UJ14 662 aa15.08■□□□□ 0
CDK5RAP3-237ENST00000585163 MAFGO15525 162 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 CLTAP09496 248 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 KLRC2P26717 231 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 NOMO3P69849 1222 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 BNIP1Q12981 228 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 TMEM63BQ5T3F8 832 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 TDRD10Q5VZ19 366 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 IZUMO3Q5VZ72 239 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 LMBRD2Q68DH5 695 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 GPATCH11Q8N954 259 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 GDAP1Q8TB36 358 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 MAGEB18Q96M61 343 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 TGS1Q96RS0 853 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 FNBP1Q96RU3 617 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 FAM118BQ9BPY3 351 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 CCDC77Q9BR77 488 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 C11orf70Q9BRQ4 267 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 ADAM22Q9P0K1 906 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 TBK1Q9UHD2 729 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 COL4A5P29400 1685 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 DKC1O60832 514 aaKnown RBP eCLIP15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 CFHP08603 1231 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 TNNI1P19237 187 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 STX2P32856 288 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 PLEKHA7Q6IQ23 1121 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 ANKS1BQ7Z6G8 1248 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 PNMA8AQ86V59 439 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 ABRAQ8N0Z2 381 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 ZBED3Q96IU2 234 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 IFT74Q96LB3 600 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 C9orf72Q96LT7 481 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 FOXP3Q9BZS1 431 aa15.07■□□□□ 0
CDK5RAP3-237ENST00000585163 H0YCG3 227 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 ABHD2P08910 425 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 NQO1P15559 274 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 ABCD1P33897 745 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 PIK3CAP42336 1068 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 WNT7BP56706 349 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 E2F5Q15329 346 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 SPOPLQ6IQ16 392 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 PHF13Q86YI8 300 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 SRRM1Q8IYB3 904 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 CXorf56Q9H5V9 222 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 ECT2Q9H8V3 914 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 NKIRAS1Q9NYS0 192 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 WNT10BO00744 389 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 ZBED4O75132 1171 aa15.06■□□□□ 0
CDK5RAP3-237ENST00000585163 VNN1O95497 513 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms