RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 LARSQ9P2J5 1176 aaKnown RBP16.39■□□□□ 0.21
VAPA-209ENST00000585042 AFF4Q9UHB7 1163 aaKnown RBP16.39■□□□□ 0.21
VAPA-209ENST00000585042 FBXL5Q9UKA1 691 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 FANCMQ8IYD8 2048 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 SFI1A8K8P3 1242 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 LAMTOR5O43504 91 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 CLTAP09496 248 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 MAPTP10636 758 aaKnown RBP16.38■□□□□ 0.21
VAPA-209ENST00000585042 CYP3A5P20815 502 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 PAX3P23760 479 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 MARCKSP29966 332 aaPredicted RBP16.38■□□□□ 0.21
VAPA-209ENST00000585042 UBXN2BQ14CS0 331 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 SLC5A9Q2M3M2 681 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 PRSS36Q5K4E3 855 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 CYP4A22Q5TCH4 519 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 IQCEQ6IPM2 695 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 ZNF280DQ6N043 979 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 ZNF852Q6ZMS4 543 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 MAML2Q8IZL2 1156 aaPredicted RBP16.38■□□□□ 0.21
VAPA-209ENST00000585042 ST13P5Q8NFI4 369 aaPredicted RBP16.38■□□□□ 0.21
VAPA-209ENST00000585042 ING5Q8WYH8 240 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 C18orf25Q96B23 403 aaPredicted RBP16.38■□□□□ 0.21
VAPA-209ENST00000585042 ZBTB45Q96K62 511 aaPredicted RBP16.38■□□□□ 0.21
VAPA-209ENST00000585042 ZNF512Q96ME7 567 aaPredicted RBP16.38■□□□□ 0.21
VAPA-209ENST00000585042 TBC1D32Q96NH3 1257 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 ZFP14Q9HCL3 533 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 LTB4R2Q9NPC1 389 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 INSL5Q9Y5Q6 135 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 R4GN57 208 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 CACNA1IQ9P0X4 2223 aa16.38■□□□□ 0.21
VAPA-209ENST00000585042 MIA3Q5JRA6 1907 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 M0QZQ0 153 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 OAZ2O95190 189 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 SEC24AO95486 1093 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 LRPAP1P30533 357 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 MCM4P33991 863 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 SLC12A3P55017 1021 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 ZBTB6Q15916 424 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 TANGO2Q6ICL3 276 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 MAMSTRQ6ZN01 415 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 PDZD4Q76G19 769 aaPredicted RBP16.37■□□□□ 0.21
VAPA-209ENST00000585042 RUBCNQ92622 972 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 DDX12PQ92771 950 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 AK8Q96MA6 479 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 PNMA5Q96PV4 448 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 CORO1BQ9BR76 489 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 GPR88Q9GZN0 384 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
VAPA-209ENST00000585042 MTF2Q9Y483 593 aaPredicted RBP16.37■□□□□ 0.21
VAPA-209ENST00000585042 EP300Q09472 2414 aaPredicted RBP16.37■□□□□ 0.21
VAPA-209ENST00000585042 TTC26A0AVF1 554 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 MAN2B1O00754 1011 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 SPTLC1O15269 473 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
VAPA-209ENST00000585042 XPOTO43592 962 aaKnown RBP16.36■□□□□ 0.21
VAPA-209ENST00000585042 KINO60870 393 aaKnown RBP16.36■□□□□ 0.21
VAPA-209ENST00000585042 ADRB2P07550 413 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 PLA2G4BP0C869 781 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 ABCD1P33897 745 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 EPHA5P54756 1037 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 NCKAP1LP55160 1127 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 ARPP19P56211 112 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 ADCY1Q08828 1119 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 RABEP1Q15276 862 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 MCTP1Q6DN14 999 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 BEST2Q8NFU1 509 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 E2F7Q96AV8 911 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 CDK5RAP3Q96JB5 506 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 PLA2G2FQ9BZM2 168 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 TRPV4Q9HBA0 871 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 SPATA6Q9NWH7 488 aaPredicted RBP16.36■□□□□ 0.21
VAPA-209ENST00000585042 PCDHGA2Q9Y5H1 932 aa16.36■□□□□ 0.21
VAPA-209ENST00000585042 LRRN2O75325 713 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 CEBPBP17676 345 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 AARSP49588 968 aaKnown RBP eCLIP16.35■□□□□ 0.211e-7■■□□□ 14.2
VAPA-209ENST00000585042 MLLT6P55198 1093 aaPredicted RBP16.35■□□□□ 0.21
VAPA-209ENST00000585042 YWHAHQ04917 246 aaPredicted RBP16.35■□□□□ 0.21
VAPA-209ENST00000585042 TMEM119Q4V9L6 283 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 FAM78AQ5JUQ0 283 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 POTEHQ6S545 545 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 TPRG1Q6ZUI0 275 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 HAUS6Q7Z4H7 955 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 CD302Q8IX05 232 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 SUMF1Q8NBK3 374 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 NELL1Q92832 810 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 SMARCD2Q92925 531 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 IRF7Q92985 503 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 ASB16Q96NS5 453 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 IER2Q9BTL4 223 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 TRMT61BQ9BVS5 477 aaKnown RBP16.35■□□□□ 0.21
VAPA-209ENST00000585042 FAM126AQ9BYI3 521 aaPredicted RBP16.35■□□□□ 0.21
VAPA-209ENST00000585042 ANKFY1Q9P2R3 1169 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 UBQLN1Q9UMX0 589 aaKnown RBP16.35■□□□□ 0.21
VAPA-209ENST00000585042 MYH11P35749 1972 aa16.35■□□□□ 0.21
VAPA-209ENST00000585042 VWA3AA6NCI4 1184 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 PIGRP01833 764 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 HARSP12081 509 aaKnown RBP16.34■□□□□ 0.21
VAPA-209ENST00000585042 PSMC3P17980 439 aa16.34■□□□□ 0.21
VAPA-209ENST00000585042 FCARP24071 287 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms