RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MYO1EQ12965 1108 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 NCOA4Q13772 614 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 UPP1Q16831 310 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 EXOC3L4Q17RC7 722 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 EPC2Q52LR7 807 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 C9orf57Q5W0N0 161 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 GBP6Q6ZN66 633 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 ZNF280BQ86YH2 543 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 CCDC150Q8NCX0 1101 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 CXorf38Q8TB03 319 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 TAF4BQ92750 862 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 CLP1Q92989 425 aaKnown RBP12.56□□□□□ -0.4
CDRT1-207ENST00000583965 IMPG2Q9BZV3 1241 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 GOLGA2P5Q9HBQ8 144 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 AAASQ9NRG9 546 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 RAB20Q9NX57 234 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 IFNKQ9P0W0 207 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 AGAP1Q9UPQ3 857 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 RWDD3Q9Y3V2 267 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 TRANK1O15050 2925 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 MYH10P35580 1976 aa12.56□□□□□ -0.4
CDRT1-207ENST00000583965 CHD7Q9P2D1 2997 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 A0A1W2PPC1 479 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 CASTOR2A6NHX0 329 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 VNN1O95497 513 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 POLR2BP30876 1174 aaKnown RBP12.55□□□□□ -0.4
CDRT1-207ENST00000583965 ALDH7A1P49419 539 aaKnown RBP12.55□□□□□ -0.4
CDRT1-207ENST00000583965 CLCNKBP51801 687 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 GUCY2FP51841 1108 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 UBXN1Q04323 297 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 NR1I3Q14994 352 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 SV2CQ496J9 727 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 WDR44Q5JSH3 913 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 SPOUT1Q5T280 376 aaKnown RBP12.55□□□□□ -0.4
CDRT1-207ENST00000583965 DCLRE1AQ6PJP8 1040 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 FAXDC2Q96IV6 333 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 NAP1L5Q96NT1 182 aaPredicted RBP12.55□□□□□ -0.4
CDRT1-207ENST00000583965 ERGIC2Q96RQ1 377 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 COLEC11Q9BWP8 271 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 VRTNQ9H8Y1 702 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 GCNT4Q9P109 453 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 DNAJB4Q9UDY4 337 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 FAN1Q9Y2M0 1017 aa12.55□□□□□ -0.4
CDRT1-207ENST00000583965 MRPL42Q9Y6G3 142 aaKnown RBP12.55□□□□□ -0.4
CDRT1-207ENST00000583965 A0A1W2PQC6 194 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 NRP1O14786 923 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 B4GALT3O60512 393 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 ASS1P00966 412 aaKnown RBP12.54□□□□□ -0.4
CDRT1-207ENST00000583965 CST3P01034 146 aaPredicted RBP12.54□□□□□ -0.4
CDRT1-207ENST00000583965 GALTP07902 379 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 PPM1AP35813 382 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 OR1G1P47890 313 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 SLC11A1P49279 550 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 TAF6P49848 677 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 BCAR1P56945 870 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 MYL6P60660 151 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 RAB30Q15771 203 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 ZNF699Q32M78 642 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 KCNT2Q6UVM3 1135 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 COLGALT1Q8NBJ5 622 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 EHBP1Q8NDI1 1231 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 SEMA4DQ92854 862 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 HPDLQ96IR7 371 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 FAM84AQ96KN4 292 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 FAM81BQ96LP2 452 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 ZNF558Q96NG5 402 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 TRIM5Q9C035 493 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 MSRAQ9UJ68 235 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 DAAM1Q9Y4D1 1078 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 PCDHB12Q9Y5F1 795 aa12.54□□□□□ -0.4
CDRT1-207ENST00000583965 ARHGEF37A1IGU5 675 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 TEX33O43247 280 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 TRAPPC3O43617 180 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 B3GAT3O94766 335 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 P4HA1P13674 534 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 PON1P27169 355 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDRT1-207ENST00000583965 RABGGTBP53611 331 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 LILRA4P59901 499 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 NOP14P78316 857 aaKnown RBP12.53□□□□□ -0.4
CDRT1-207ENST00000583965 ELAVL2Q12926 359 aaKnown RBP12.53□□□□□ -0.4
CDRT1-207ENST00000583965 SMYD5Q6GMV2 418 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 FAM109BQ6ICB4 259 aaPredicted RBP12.53□□□□□ -0.4
CDRT1-207ENST00000583965 TRIM65Q6PJ69 517 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 LMO3Q8TAP4 145 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 SAMD11Q96NU1 681 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 PAAF1Q9BRP4 392 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 XPO4Q9C0E2 1151 aaKnown RBP12.53□□□□□ -0.4
CDRT1-207ENST00000583965 INTS2Q9H0H0 1204 aaKnown RBP12.53□□□□□ -0.4
CDRT1-207ENST00000583965 XYLT2Q9H1B5 865 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 PLCB1Q9NQ66 1216 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 GDAP2Q9NXN4 497 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 SPG21Q9NZD8 308 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 HCSTQ9UBK5 93 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 CACNG4Q9UBN1 327 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms