RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 GTF2H1P32780 548 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 RPL9P32969 192 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 PBX3P40426 434 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 ALDH7A1P49419 539 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 CLCNKBP51801 687 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 BCAR1P56945 870 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 DSC1Q08554 894 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 TRPC3Q13507 836 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 NR1I3Q14994 352 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 SYCP1Q15431 976 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 FKBP15Q5T1M5 1219 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 TDRD10Q5VZ19 366 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 C1orf127Q8N9H9 656 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 CPLX3Q8WVH0 158 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 PAAF1Q9BRP4 392 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 LSM14BQ9BX40 385 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 PBX4Q9BYU1 374 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 TMEM8AQ9HCN3 771 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 AAASQ9NRG9 546 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 AGAP1Q9UPQ3 857 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 YBX2Q9Y2T7 364 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 LINC01553A4QN01 128 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 PODXLO00592 558 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 NRP1O14786 923 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 ZNF500O60304 480 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-216ENST00000583804 TADA2AO75478 443 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 B3GAT3O94766 335 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 CST3P01034 146 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-216ENST00000583804 TPM3P06753 285 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 GALTP07902 379 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 LAG3P18627 525 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 SLC11A1P49279 550 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 FMO5P49326 533 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 MXI1P50539 228 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 RBP5P82980 135 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 MYL7Q01449 175 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 CETN1Q12798 172 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 ARID5BQ14865 1188 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 RAB30Q15771 203 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 ZACNQ401N2 412 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 CBWD6Q4V339 395 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 CBWD3Q5JTY5 395 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 CBWD5Q5RIA9 395 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 C9orf57Q5W0N0 161 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 KRT39Q6A163 491 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 DCLRE1AQ6PJP8 1040 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 KCNT2Q6UVM3 1135 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 VSTM4Q8IW00 320 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 UROC1Q96N76 676 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 ZNF558Q96NG5 402 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 TMEM175Q9BSA9 504 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 NKX2-4Q9H2Z4 354 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 ITGA11Q9UKX5 1188 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 ZKSCAN5Q9Y2L8 839 aa11.8□□□□□ -0.52
TOP3A-216ENST00000583804 TRIP11Q15643 1979 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 FNDC1Q4ZHG4 1894 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-216ENST00000583804 A0A1W2PPC1 479 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 PPEF2O14830 753 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 N4BP1O75113 896 aaKnown RBP11.79□□□□□ -0.52
TOP3A-216ENST00000583804 LRRN2O75325 713 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 LRPAP1P30533 357 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 PIK3CAP42336 1068 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-216ENST00000583804 LRMPQ12912 555 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 NCOA4Q13772 614 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 UPP1Q16831 310 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 SCARA3Q6AZY7 606 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 COLGALT1Q8NBJ5 622 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 HASPINQ8TF76 798 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 FAM207AQ9NSI2 230 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-216ENST00000583804 SIX4Q9UIU6 781 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 MTUS1Q9ULD2 1270 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 NUB1Q9Y5A7 615 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 PCDHB12Q9Y5F1 795 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 ANK1P16157 1881 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 RALGAPA2Q2PPJ7 1873 aa11.79□□□□□ -0.52
TOP3A-216ENST00000583804 COL4A6Q14031 1691 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 ANO9A1A5B4 782 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 F8W810 466 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 PIRO00625 290 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 ARHGEF15O94989 841 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 HLA-DRAP01903 254 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 IGFBP6P24592 240 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-216ENST00000583804 CTNNB1P35222 781 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 MYL6P60660 151 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 SMAD3P84022 425 aaKnown RBP11.78□□□□□ -0.52
TOP3A-216ENST00000583804 PPP2R2DQ66LE6 453 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 C15orf39Q6ZRI6 1047 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 CCDC150Q8NCX0 1101 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 FBXL13Q8NEE6 735 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 HPDLQ96IR7 371 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 C17orf80Q9BSJ5 609 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 SLC28A3Q9HAS3 691 aa11.78□□□□□ -0.52
TOP3A-216ENST00000583804 GCNT4Q9P109 453 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms