RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 TIPINQ9BVW5 301 aa16.53■□□□□ 0.24
SREBF1-222ENST00000583732 C17orf75Q9HAS0 396 aa16.53■□□□□ 0.24
SREBF1-222ENST00000583732 PTPRZ1P23471 2315 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-222ENST00000583732 COL4A2P08572 1712 aa16.53■□□□□ 0.24
SREBF1-222ENST00000583732 PLA2G4BP0C869 781 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 MAPTP10636 758 aaKnown RBP16.52■□□□□ 0.24
SREBF1-222ENST00000583732 MYL4P12829 197 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 GJA1P17302 382 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 FCARP24071 287 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 CCR2P41597 374 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 SMTNP53814 917 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 CSTF1Q05048 431 aaKnown RBP16.52■□□□□ 0.24
SREBF1-222ENST00000583732 ADCY1Q08828 1119 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 TWF1Q12792 350 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 MRPL58Q14197 206 aaKnown RBP16.52■□□□□ 0.24
SREBF1-222ENST00000583732 TCEAL8Q8IYN2 117 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 ELMOD1Q8N336 334 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 DCLK2Q8N568 766 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 SPIRE2Q8WWL2 714 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 ELSPBP1Q96BH3 223 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 HAPLN2Q9GZV7 340 aa16.52■□□□□ 0.24
SREBF1-222ENST00000583732 AVENQ9NQS1 362 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-222ENST00000583732 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-222ENST00000583732 ANK1P16157 1881 aa16.52■□□□□ 0.23
SREBF1-222ENST00000583732 CACNA1IQ9P0X4 2223 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 RIF1Q5UIP0 2472 aaKnown RBP16.51■□□□□ 0.23
SREBF1-222ENST00000583732 CLDN3O15551 220 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 KINO60870 393 aaKnown RBP16.51■□□□□ 0.23
SREBF1-222ENST00000583732 OR4Q2P0C623 313 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 MARCKSP29966 332 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-222ENST00000583732 TNFSF9P41273 254 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 GUCY2FP51841 1108 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 SLC12A3P55017 1021 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 RILPL1Q5EBL4 403 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 FAM78AQ5JUQ0 283 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 ZBTB41Q5SVQ8 909 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 HYIQ5T013 277 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 CYP4A22Q5TCH4 519 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 TPGS2Q68CL5 300 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 RNF19BQ6ZMZ0 732 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 SYT2Q8N9I0 419 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-222ENST00000583732 APPL2Q8NEU8 664 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 KIF12Q96FN5 646 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 PGLYRP2Q96PD5 576 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 BRD9Q9H8M2 597 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 NDRG2Q9UN36 371 aaKnown RBP16.51■□□□□ 0.23
SREBF1-222ENST00000583732 PCDHB8Q9UN66 801 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 KIF3AQ9Y496 699 aa16.51■□□□□ 0.23
SREBF1-222ENST00000583732 TSC2P49815 1807 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 H3BQV1 296 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 ZNF197O14709 1029 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 GJB2P29033 226 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 FOXK2Q01167 660 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 MCL1Q07820 350 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 DHX8Q14562 1220 aaKnown RBP16.5■□□□□ 0.23
SREBF1-222ENST00000583732 IQCEQ6IPM2 695 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 TSSK4Q6SA08 328 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 ZPBP2Q6X784 338 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 ZNF852Q6ZMS4 543 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 ZNF512Q96ME7 567 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-222ENST00000583732 ZSWIM3Q96MP5 696 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 NTPCRQ9BSD7 190 aaKnown RBP16.5■□□□□ 0.23
SREBF1-222ENST00000583732 OSBPL6Q9BZF3 934 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 ZFP14Q9HCL3 533 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 CEP72Q9P209 647 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 AFF4Q9UHB7 1163 aaKnown RBP16.5■□□□□ 0.23
SREBF1-222ENST00000583732 YIPF1Q9Y548 306 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 SPTBN4Q9H254 2564 aa16.5■□□□□ 0.23
SREBF1-222ENST00000583732 LIG4P49917 911 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 NCKAP1LP55160 1127 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 YWHAHQ04917 246 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-222ENST00000583732 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 TEAD2Q15562 447 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 TMEM119Q4V9L6 283 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 VITQ6UXI7 678 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 DSTYKQ6XUX3 929 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 RUBCNQ92622 972 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 RMDN1Q96DB5 314 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 ASB16Q96NS5 453 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 ASAH2Q9NR71 780 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 FBXO4Q9UKT5 387 aa16.49■□□□□ 0.23
SREBF1-222ENST00000583732 K7ENM7 598 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 HNRNPDLO14979 420 aaKnown RBP16.48■□□□□ 0.23
SREBF1-222ENST00000583732 NCAM2O15394 837 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 MOSPD3O75425 235 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 CLTAP09496 248 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 GDI1P31150 447 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 VIPR2P41587 438 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 MAGEA9P43362 315 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 RABEP1Q15276 862 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 ARSHQ5FYA8 562 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 ERMP1Q7Z2K6 904 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 HAUS6Q7Z4H7 955 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 GPBP1Q86WP2 473 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 SUMF1Q8NBK3 374 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 DNASE1L2Q92874 299 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 FAM212AQ96EL1 285 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 REEP2Q9BRK0 252 aa16.48■□□□□ 0.23
SREBF1-222ENST00000583732 TRMT61BQ9BVS5 477 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms