RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TCEAL3Q969E4 200 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 OXCT2Q9BYC2 517 aaPredicted RBP12.25□□□□□ -0.45
CASC3-208ENST00000583649 VPS54Q9P1Q0 977 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 AFF4Q9UHB7 1163 aaKnown RBP12.25□□□□□ -0.45
CASC3-208ENST00000583649 NUB1Q9Y5A7 615 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 FRYQ5TBA9 3013 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 TICRRQ7Z2Z1 1910 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 DOCK6Q96HP0 2047 aa12.25□□□□□ -0.45
CASC3-208ENST00000583649 EML1O00423 815 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 PTGESO14684 152 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 TBX3O15119 743 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 APBB3O95704 486 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 PRKCBP05771 671 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 ARL2P36404 184 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 CCR2P41597 374 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 DPP6P42658 865 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 CLCNKBP51801 687 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 YARSP54577 528 aaKnown RBP12.24□□□□□ -0.45
CASC3-208ENST00000583649 EXOSC10Q01780 885 aaKnown RBP12.24□□□□□ -0.45
CASC3-208ENST00000583649 SPEGQ15772 3267 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 MAPK6Q16659 721 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 UPP1Q16831 310 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 DCAF4L1Q3SXM0 396 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 CTXN3Q4LDR2 81 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 USP39Q53GS9 565 aaKnown RBP12.24□□□□□ -0.45
CASC3-208ENST00000583649 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 KIAA1211LQ6NV74 962 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 PDZD3Q86UT5 571 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 PROSER1Q86XN7 944 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 TPH2Q8IWU9 490 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 SLFN12Q8IYM2 578 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 FAM177A1Q8N128 213 aaPredicted RBP12.24□□□□□ -0.45
CASC3-208ENST00000583649 APPL2Q8NEU8 664 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 NUSAP1Q9BXS6 441 aaKnown RBP12.24□□□□□ -0.45
CASC3-208ENST00000583649 SLC26A6Q9BXS9 759 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 LSG1Q9H089 658 aaKnown RBP12.24□□□□□ -0.45
CASC3-208ENST00000583649 DUSP15Q9H1R2 295 aaPredicted RBP12.24□□□□□ -0.45
CASC3-208ENST00000583649 TOPORSQ9NS56 1045 aaPredicted RBP12.24□□□□□ -0.45
CASC3-208ENST00000583649 ANKEF1Q9NU02 776 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 GTSE1Q9NYZ3 720 aa12.24□□□□□ -0.45
CASC3-208ENST00000583649 HYAL3O43820 417 aaPredicted RBP12.23□□□□□ -0.45
CASC3-208ENST00000583649 CPB1P15086 417 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 MARCKSP29966 332 aaPredicted RBP12.23□□□□□ -0.45
CASC3-208ENST00000583649 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 ATXN3P54252 364 aaPredicted RBP12.23□□□□□ -0.45
CASC3-208ENST00000583649 CYP4A11Q02928 519 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 HNRNPDQ14103 355 aaKnown RBP12.23□□□□□ -0.45
CASC3-208ENST00000583649 FAM187BQ17R55 369 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
CASC3-208ENST00000583649 NCAPH2Q6IBW4 605 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 TXNDC11Q6PKC3 985 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 KRT25Q7Z3Z0 450 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 CYP2U1Q7Z449 544 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 ARID3BQ8IVW6 561 aaPredicted RBP12.23□□□□□ -0.45
CASC3-208ENST00000583649 HS6ST3Q8IZP7 471 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 BLIDQ8IZY5 108 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 HDDC3Q8N4P3 179 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 DEFB124Q8NES8 71 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 TTC8Q8TAM2 541 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 BPIFB1Q8TDL5 484 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 ACDQ96AP0 544 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 GCNAQ96QF7 691 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 ZMYM5Q9UJ78 669 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 GDAQ9Y2T3 454 aa12.23□□□□□ -0.45
CASC3-208ENST00000583649 A0A1W2PRU2 124 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 ADAMTS3O15072 1205 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 TOP3BO95985 862 aaKnown RBP12.22□□□□□ -0.45
CASC3-208ENST00000583649 GJA1P17302 382 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 DRD1P21728 446 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 GLRA2P23416 452 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 SIM1P81133 766 aaPredicted RBP12.22□□□□□ -0.45
CASC3-208ENST00000583649 ZNF423Q2M1K9 1284 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 SOWAHCQ53LP3 525 aaPredicted RBP12.22□□□□□ -0.45
CASC3-208ENST00000583649 LMBRD2Q68DH5 695 aaPredicted RBP12.22□□□□□ -0.45
CASC3-208ENST00000583649 ITIH5Q86UX2 942 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 MCPH1Q8NEM0 835 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 ASAP3Q8TDY4 903 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 DYDC2Q96IM9 177 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 TCEANC2Q96MN5 208 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
CASC3-208ENST00000583649 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 EBF1Q9UH73 591 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 FBXL5Q9UKA1 691 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 VAV3Q9UKW4 847 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 GPSM3Q9Y4H4 160 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 ASB3Q9Y575 518 aa12.22□□□□□ -0.45
CASC3-208ENST00000583649 NOTCH4Q99466 2003 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 SEC24AO95486 1093 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 RPL9P32969 192 aaKnown RBP12.21□□□□□ -0.45
CASC3-208ENST00000583649 MCM2P49736 904 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 DGKEP52429 567 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 CTTNQ14247 550 aaKnown RBP12.21□□□□□ -0.45
CASC3-208ENST00000583649 NAB2Q15742 525 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 TMEM196Q5HYL7 178 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.45
CASC3-208ENST00000583649 POTEHQ6S545 545 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 SYT13Q7L8C5 426 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 GLIS3Q8NEA6 775 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms