RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 CCDC73Q6ZRK6 1079 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MAML2Q8IZL2 1156 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 C4orf32Q8N8J7 132 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KRI1Q8N9T8 703 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ZNF461Q8TAF7 563 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RMDN1Q96DB5 314 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MCRS1Q96EZ8 462 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TIGD1Q96MW7 591 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CLIC6Q96NY7 704 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NELL2Q99435 816 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TNMDQ9H2S6 317 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 GOLGA2P5Q9HBQ8 144 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 POLD4Q9HCU8 107 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 AVENQ9NQS1 362 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SLC38A7Q9NVC3 462 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 GDE1Q9NZC3 331 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 LRWD1Q9UFC0 647 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NOL7Q9UMY1 257 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KIAA1024Q9UPX6 916 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SRPRBQ9Y5M8 271 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 WDFY4Q6ZS81 3184 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 FANCMQ8IYD8 2048 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RIF1Q5UIP0 2472 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ARHGEF37A1IGU5 675 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 H7C4K7 107 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PODXLO00592 558 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PRRG1O14668 218 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SPTLC1O15269 473 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ZNF202O95125 648 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 BMP15O95972 392 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 IGFBP6P24592 240 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PEX3P56589 373 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 OSTNP61366 133 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ROR1Q01973 937 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CSTF1Q05048 431 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SOX4Q06945 474 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DMP1Q13316 513 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ECM1Q16610 540 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 XKR4Q5GH76 650 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SLC8B1Q6J4K2 584 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TPRG1Q6ZUI0 275 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DGLUCYQ7Z3D6 616 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CEP120Q8N960 986 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 C3orf58Q8NDZ4 430 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SNX29Q8TEQ0 813 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ACO2Q99798 780 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MRPL4Q9BYD3 311 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RAB34Q9BZG1 259 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CDT1Q9H211 546 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TMEM134Q9H6X4 195 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MRPS17Q9Y2R5 130 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MTF2Q9Y483 593 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NUB1Q9Y5A7 615 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NOTCH4Q99466 2003 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 COL4A3Q01955 1670 aa10.6□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TRIP11Q15643 1979 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 WDR27A2RRH5 827 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SYN3O14994 580 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ABLIM3O94929 683 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CCDC192P0DO97 292 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MCF2P10911 925 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PFKFB1P16118 471 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CEBPBP17676 345 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CD72P21854 359 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RPL9P32969 192 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NPTX2P47972 431 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ARPP19P56211 112 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 GRIN1Q05586 938 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PDIA5Q14554 519 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PUM1Q14671 1186 aaKnown RBP eCLIP10.59□□□□□ -0.716e-7■□□□□ 10.6
CDK5RAP3-227ENST00000583352 SLC5A9Q2M3M2 681 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ALKAL1Q6UXT8 129 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ZNF852Q6ZMS4 543 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ELOA2Q8IYF1 753 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TCEAL8Q8IYN2 117 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DCLK2Q8N568 766 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SUMF1Q8NBK3 374 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ATRIPQ8WXE1 791 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DNASE1L2Q92874 299 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CLDN23Q96B33 292 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ELSPBP1Q96BH3 223 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DRC1Q96MC2 740 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ACAP3Q96P50 834 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CORO1BQ9BR76 489 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TCHPQ9BT92 498 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PLA2G2FQ9BZM2 168 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CYP4F11Q9HBI6 524 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PTPRHQ9HD43 1115 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KMT5AQ9NQR1 393 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NCDNQ9UBB6 729 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DNM3Q9UQ16 869 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PCDHGA2Q9Y5H1 932 aa10.59□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PATJQ8NI35 1801 aa10.58□□□□□ -0.72
CDK5RAP3-227ENST00000583352 E9PMD0 336 aa10.58□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZNF197O14709 1029 aa10.58□□□□□ -0.72
CDK5RAP3-227ENST00000583352 HIP1RO75146 1068 aa10.58□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MICAL2O94851 1124 aa10.58□□□□□ -0.72
CDK5RAP3-227ENST00000583352 HARSP12081 509 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ATF2P15336 505 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms