RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 PCDHB13Q9Y5F0 798 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 PATJQ8NI35 1801 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 SFI1A8K8P3 1242 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 MAFO75444 373 aaPredicted RBP19.45■□□□□ 0.7
SNX11-212ENST00000583320 FGFR1OPO95684 399 aaKnown RBP19.45■□□□□ 0.7
SNX11-212ENST00000583320 SPATA31D3P0C874 917 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 SPAG1Q07617 926 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 HTR4Q13639 388 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 EMC2Q15006 297 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 CDKAL1Q5VV42 579 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 SPATA31D4Q6ZUB0 917 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 RSPH1Q8WYR4 309 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 SMG7Q92540 1137 aaKnown RBP19.45■□□□□ 0.7
SNX11-212ENST00000583320 HVCN1Q96D96 273 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 TSG101Q99816 390 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 SH2D3AQ9BRG2 576 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 NTPCRQ9BSD7 190 aaKnown RBP19.45■□□□□ 0.7
SNX11-212ENST00000583320 STRA6Q9BX79 667 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 THAP9Q9H5L6 903 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 TBC1D7Q9P0N9 293 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 MIA3Q5JRA6 1907 aa19.45■□□□□ 0.7
SNX11-212ENST00000583320 ANHXE9PGG2 379 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 H0YCG3 227 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 ZNF623O75123 536 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 PPP1R37O75864 691 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 GCNT3O95395 438 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 ATXN1P54253 815 aaKnown RBP19.44■□□□□ 0.7
SNX11-212ENST00000583320 ZCWPW2Q504Y3 356 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 DCLRE1AQ6PJP8 1040 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 GLIS3Q8NEA6 775 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 RPS6KC1Q96S38 1066 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 DUSP9Q99956 384 aaKnown RBP19.44■□□□□ 0.7
SNX11-212ENST00000583320 RPP25Q9BUL9 199 aaKnown RBP19.44■□□□□ 0.7
SNX11-212ENST00000583320 HERC2P3Q9BVR0 1158 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 RHOBTB2Q9BYZ6 727 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 KCTD10Q9H3F6 313 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 NUMBLQ9Y6R0 609 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 DOCK6Q96HP0 2047 aa19.44■□□□□ 0.7
SNX11-212ENST00000583320 IGKV6-21A0A0C4DH24 114 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 CARNS1A5YM72 827 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 F8W810 466 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 PDXKO00764 312 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 NRP1O14786 923 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 GLUD1P00367 558 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 SOD2P04179 222 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 LAMP2P13473 410 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 SFPQP23246 707 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNX11-212ENST00000583320 ARL2P36404 184 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 SMTNP53814 917 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 PMS1P54277 932 aaKnown RBP19.43■□□□□ 0.7
SNX11-212ENST00000583320 NCKAP1LP55160 1127 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 CCDC173Q0VFZ6 552 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 DMP1Q13316 513 aaPredicted RBP19.43■□□□□ 0.7
SNX11-212ENST00000583320 PPP2R5AQ15172 486 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 KNOP1Q1ED39 458 aaKnown RBP19.43■□□□□ 0.7
SNX11-212ENST00000583320 EDRF1Q3B7T1 1238 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 ANKRD40Q6AI12 368 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 GET4Q7L5D6 327 aaPredicted RBP19.43■□□□□ 0.7
SNX11-212ENST00000583320 KSR1Q8IVT5 923 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 TCP11Q8WWU5 503 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 PDLIM2Q96JY6 352 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 IFT74Q96LB3 600 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 FGFBP2Q9BYJ0 223 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 SLC2A4RGQ9NR83 387 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 TRAF3IP3Q9Y228 551 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 PRG3Q9Y2Y8 225 aaPredicted RBP19.43■□□□□ 0.7
SNX11-212ENST00000583320 PCDHB2Q9Y5E7 798 aa19.43■□□□□ 0.7
SNX11-212ENST00000583320 TRIM49BA6NDI0 452 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 AP5Z1O43299 807 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 ADCY5O95622 1261 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 EFEMP2O95967 443 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 POMCP01189 267 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 URODP06132 367 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 NMT1P30419 496 aaKnown RBP19.42■□□□□ 0.7
SNX11-212ENST00000583320 RAB27AP51159 221 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 CASP5P51878 434 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 NFIL3Q16649 462 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 VARS2Q5ST30 1063 aaKnown RBP19.42■□□□□ 0.7
SNX11-212ENST00000583320 MAEAQ7L5Y9 396 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 FAM114A1Q8IWE2 563 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 ZC3H3Q8IXZ2 948 aaKnown RBP19.42■□□□□ 0.7
SNX11-212ENST00000583320 RNF168Q8IYW5 571 aaPredicted RBP19.42■□□□□ 0.7
SNX11-212ENST00000583320 CSGALNACT2Q8N6G5 542 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 NXPE3Q969Y0 559 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 PPP1R9BQ96SB3 815 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 TRIM5Q9C035 493 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 POLR3FQ9H1D9 316 aaPredicted RBP19.42■□□□□ 0.7
SNX11-212ENST00000583320 POLD4Q9HCU8 107 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 GPRC5CQ9NQ84 441 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 SAMSN1Q9NSI8 373 aaKnown RBP19.42■□□□□ 0.7
SNX11-212ENST00000583320 FAN1Q9Y2M0 1017 aa19.42■□□□□ 0.7
SNX11-212ENST00000583320 MTF2Q9Y483 593 aaPredicted RBP19.42■□□□□ 0.7
SNX11-212ENST00000583320 CBFA2T2O43439 604 aa19.41■□□□□ 0.7
SNX11-212ENST00000583320 PRPF6O94906 941 aaKnown RBP19.41■□□□□ 0.7
SNX11-212ENST00000583320 PAPLNO95428 1278 aa19.41■□□□□ 0.7
SNX11-212ENST00000583320 ADH1AP07327 375 aa19.41■□□□□ 0.7
SNX11-212ENST00000583320 SKIP12755 728 aa19.41■□□□□ 0.7
SNX11-212ENST00000583320 CDK11BP21127 795 aaKnown RBP19.41■□□□□ 0.7
SNX11-212ENST00000583320 EEF1GP26641 437 aaKnown RBP19.41■□□□□ 0.7
SNX11-212ENST00000583320 ZNF75DP51815 510 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms