RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PARD3BQ8TEW8 1205 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 ZNF384Q8TF68 577 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 MTBPQ96DY7 904 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 MED15Q96RN5 788 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 MMP19Q99542 508 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 SH3GL2Q99962 352 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 PAGR1Q9BTK6 254 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 RRN3Q9NYV6 651 aa6.19□□□□□ -1.42
RTTN-209ENST00000583043 COL1A1P02452 1464 aaPredicted RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 AXLP30530 894 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 YWHAGP61981 247 aaKnown RBP eCLIP6.18□□□□□ -1.42
RTTN-209ENST00000583043 PTK6Q13882 451 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ASTE1Q2TB18 679 aaPredicted RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 SLFN11Q7Z7L1 901 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 PPIL6Q8IXY8 311 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ANKRD13AQ8IZ07 590 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 MFSD14AQ96MC6 490 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 SLC38A7Q9NVC3 462 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 NOP53Q9NZM5 478 aaKnown RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 REXO2Q9Y3B8 237 aaKnown RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 MAST2Q6P0Q8 1798 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 LRRIQ3A6PVS8 624 aaPredicted RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 RASA4BC9J798 803 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 H3BRJ5 948 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 IGF2BP3O00425 579 aaKnown RBP eCLIP6.18□□□□□ -1.42
RTTN-209ENST00000583043 ZNF185O15231 689 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 RASA4O43374 803 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 BRAFP15056 766 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ICAM3P32942 547 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 SERPINB6P35237 376 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 KLK7P49862 253 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 LIG3P49916 1009 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 PSMC1P62191 440 aaKnown RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 ROR1Q01973 937 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 DEUP1Q05D60 604 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 HGSNATQ68CP4 663 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 OR6B2Q6IFH4 312 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 IRF2BP2Q7Z5L9 587 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 PNMA8AQ86V59 439 aaPredicted RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 CCDC117Q8IWD4 279 aaPredicted RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 AKT1S1Q96B36 256 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 LRRC39Q96DD0 335 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 SAYSD1Q9NPB0 183 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ST7Q9NRC1 585 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 TRIM10Q9UDY6 481 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 AKT3Q9Y243 479 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 USP15Q9Y4E8 981 aaPredicted RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 TACC3Q9Y6A5 838 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 FAM47DPA6NHR8 397 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 KPNA7A9QM74 516 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 VWA5AO00534 786 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ARP10275 920 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 MX2P20592 715 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 CA4P22748 312 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 JAM2P57087 298 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ICE2Q659A1 982 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 MTHFD1LQ6UB35 978 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 MPZL3Q6UWV2 235 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 PHF13Q86YI8 300 aaPredicted RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 TAAR1Q96RJ0 339 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 TMEM117Q9H0C3 514 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ANGPTL2Q9UKU9 493 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 USP20Q9Y2K6 914 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 KPNA6O60684 536 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 SLC12A2P55011 1212 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 NFX1Q12986 1120 aaKnown RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 HIF1AQ16665 826 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 EPC2Q52LR7 807 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 DPP9Q86TI2 863 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ERO1BQ86YB8 467 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 CTAGE3PQ8IX95 158 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 HEXIM2Q96MH2 286 aaKnown RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 NTPCRQ9BSD7 190 aaKnown RBP6.18□□□□□ -1.42
RTTN-209ENST00000583043 PCDH9Q9HC56 1237 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 ZNF446Q9NWS9 450 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 SLC12A6Q9UHW9 1150 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 COQ4Q9Y3A0 265 aa6.18□□□□□ -1.42
RTTN-209ENST00000583043 FAM196BA6NMK8 535 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 CAPN9O14815 690 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 VCAM1P19320 739 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 FDFT1P37268 417 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 DNAJC3Q13217 504 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 DBN1Q16643 649 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ZC2HC1CQ53FD0 456 aaPredicted RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 WDR75Q8IWA0 830 aaKnown RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 MCOLN2Q8IZK6 566 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 PAF1Q8N7H5 531 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ZNF398Q8TD17 642 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 LRRC4Q9HBW1 653 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 DMGDHQ9UI17 866 aaKnown RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 PTPN22Q9Y2R2 807 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SHOX2O60902 331 aaPredicted RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 ATP2C2O75185 946 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 PLEKP08567 350 aaPredicted RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 GHRHRQ02643 423 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SNAPC2Q13487 334 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 TMED2Q15363 201 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 FSCBQ5H9T9 825 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 EFHC1Q5JVL4 640 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 KCNK18Q7Z418 384 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms