RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 TNNC1P63316 161 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NOP14P78316 857 aaKnown RBP9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 HTRA4P83105 476 aaPredicted RBP9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 DSC1Q08554 894 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NAB2Q15742 525 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 SV2CQ496J9 727 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 EPC2Q52LR7 807 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 WDR44Q5JSH3 913 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 CHRDL2Q6WN34 429 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ZNF280BQ86YH2 543 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 LRRC52Q8N7C0 313 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 RABGGTAQ92696 567 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 TAF4BQ92750 862 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ZNF689Q96CS4 500 aaPredicted RBP9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 HPDLQ96IR7 371 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ZNF558Q96NG5 402 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NT5C1BQ96P26 610 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 RAD9AQ99638 391 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 PI4K2AQ9BTU6 479 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 LSM14BQ9BX40 385 aaKnown RBP9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NRDE2Q9H7Z3 1164 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 RAB20Q9NX57 234 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 DNAJB4Q9UDY4 337 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 SIX4Q9UIU6 781 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NUB1Q9Y5A7 615 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 MRPL42Q9Y6G3 142 aaKnown RBP9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 KIAA1671Q9BY89 1806 aa9.79□□□□□ -0.84
PDLIM1P2-201ENST00000582923 GRXCR1A8MXD5 290 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 PMM2O15305 246 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 KIF4AO95239 1232 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 P4HA1P13674 534 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ATICP31939 592 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 PBX3P40426 434 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 SLC11A1P49279 550 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ALDH7A1P49419 539 aaKnown RBP9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ZNF75DP51815 510 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 RABGGTBP53611 331 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 BCAR1P56945 870 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 LRMPQ12912 555 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NR1I3Q14994 352 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 PTPN21Q16825 1174 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 UPP1Q16831 310 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ZNF667Q5HYK9 610 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 FAM109BQ6ICB4 259 aaPredicted RBP9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 TRIM65Q6PJ69 517 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 SCARA5Q6ZMJ2 495 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 COLGALT2Q8IYK4 626 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 TDHQ8IZJ6 230 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NEK11Q8NG66 645 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 HASPINQ8TF76 798 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ANP32BQ92688 251 aaKnown RBP9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 SEMA4DQ92854 862 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 ERGIC2Q96RQ1 377 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 PAAF1Q9BRP4 392 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 TMEM175Q9BSA9 504 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 COLEC11Q9BWP8 271 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NIF3L1Q9GZT8 377 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 FAM207AQ9NSI2 230 aaPredicted RBP9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 FAN1Q9Y2M0 1017 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 COQ4Q9Y3A0 265 aa9.78□□□□□ -0.84
PDLIM1P2-201ENST00000582923 GBF1Q92538 1859 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 A0A1W2PQC6 194 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ANO9A1A5B4 782 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CARNS1A5YM72 827 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PIRO00625 290 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 NRP1O14786 923 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 AP5Z1O43299 807 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 B3GAT3O94766 335 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ASS1P00966 412 aaKnown RBP9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SLC9A1P19634 815 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PON1P27169 355 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 BMP8BP34820 402 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CTNNB1P35222 781 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PPM1AP35813 382 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 KLK7P49862 253 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 RAB30Q15771 203 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 WDR72Q3MJ13 1102 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SPOPLQ6IQ16 392 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 DCLRE1AQ6PJP8 1040 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 DSTYKQ6XUX3 929 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 DRC7Q8IY82 874 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PPM1KQ8N3J5 372 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 COLGALT1Q8NBJ5 622 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 EHBP1Q8NDI1 1231 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 C3orf58Q8NDZ4 430 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CXorf38Q8TB03 319 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ELMO3Q96BJ8 720 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 MRFAP1L1Q96HT8 127 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 MMS19Q96T76 1030 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 XYLT2Q9H1B5 865 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CWH43Q9H720 699 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 APEX2Q9UBZ4 518 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 MSRAQ9UJ68 235 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SIK3Q9Y2K2 1263 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PCDHB12Q9Y5F1 795 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PCDHA11Q9Y5I1 949 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms