RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	GNLY	P22749	145 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	MCC	P23508	829 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	CCR2	P41597	374 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	RPL6	Q02878	288 aa	Known RBP	5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	CLCA4	Q14CN2	919 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	CRY1	Q16526	586 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	HLA-B	Q31612	363 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	INAVA	Q3KP66	663 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	USP41	Q3LFD5	358 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	EGFLAM	Q63HQ2	1017 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	HIST2H2BD	Q6DRA6	164 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	USP53	Q70EK8	1073 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	SPDYE1	Q8NFV5	336 aa	Predicted RBP	5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	USP33	Q8TEY7	942 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	EZH1	Q92800	747 aa	Predicted RBP	5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	PDCD2L	Q9BRP1	358 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	GPR88	Q9GZN0	384 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	DACT1	Q9NYF0	836 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	MMP17	Q9ULZ9	603 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	VPS4A	Q9UN37	437 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772		A0A1B0GTW7	788 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	ARHGEF37	A1IGU5	675 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	MOSPD3	O75425	235 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	HSPD1	P10809	573 aa	Known RBP	5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	TCF7	P36402	384 aa	Predicted RBP	5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	SREBF1	P36956	1147 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	PHKA2	P46019	1235 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	ADCY7	P51828	1080 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	GABRE	P78334	506 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	BNC1	Q01954	994 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	CCDC157	Q569K6	752 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	UTP14C	Q5TAP6	766 aa	Known RBP	5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	CYFIP1	Q7L576	1253 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	GDF7	Q7Z4P5	450 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	FAM114A1	Q8IWE2	563 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	CCDC146	Q8IYE0	955 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	KIAA0319L	Q8IZA0	1049 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	LCORL	Q8N3X6	602 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	ENAH	Q8N8S7	591 aa	Predicted RBP	5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	SPRYD3	Q8NCJ5	442 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	TNPO1	Q92973	898 aa	Known RBP	5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	EXOC4	Q96A65	974 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	TCEAL4	Q96EI5	215 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	ZNF419	Q96HQ0	510 aa	Predicted RBP	5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	TBC1D32	Q96NH3	1257 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	SENP7	Q9BQF6	1050 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	POLR1B	Q9H9Y6	1135 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	SNTG2	Q9NY99	539 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	TELO2	Q9Y4R8	837 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	FPGT-TNNI3K	V9GXZ4	949 aa		5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	COL27A1	Q8IZC6	1860 aa	Predicted RBP	5.7	□□□□□ -1.5
MSI2-216	ENST00000582772	ARHGAP10	A1A4S6	786 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	ENC1	O14682	589 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	N4BP3	O15049	544 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	LZTS3	O60299	673 aa	Predicted RBP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	ZNF623	O75123	536 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	GPR32	O75388	356 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	MPO	P05164	745 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	KRT7	P08729	469 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	CSTF2	P33240	577 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	PTGER4	P35408	488 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	IGBP1	P78318	339 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	AMPD2	Q01433	879 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	TNK2	Q07912	1038 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	SPIRE1	Q08AE8	756 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	KCNAB2	Q13303	367 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	PLCB4	Q15147	1175 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	CCDC158	Q5M9N0	1113 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	MTHFD1L	Q6UB35	978 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	GLYCTK	Q8IVS8	523 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	ARL14EP	Q8N8R7	260 aa	Predicted RBP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	LEMD2	Q8NC56	503 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	DCAF4	Q8WV16	495 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	DNASE2B	Q8WZ79	361 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	TSR2	Q969E8	191 aa	Known RBP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	HSPA12B	Q96MM6	686 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	LRRC3B	Q96PB8	259 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	INPP4A	Q96PE3	977 aa	Predicted RBP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	OSMR	Q99650	979 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	LZTS2	Q9BRK4	669 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	GBP3	Q9H0R5	595 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	KANSL3	Q9P2N6	904 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	ARPP21	Q9UBL0	812 aa	Predicted RBP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	TJP2	Q9UDY2	1190 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	ISY1	Q9ULR0	285 aa	Known RBP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	TBX20	Q9UMR3	447 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	GINS2	Q9Y248	185 aa		5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	EPPK1	P58107	5090 aa	Known RBP	5.69	□□□□□ -1.5
MSI2-216	ENST00000582772	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.68	□□□□□ -1.5
MSI2-216	ENST00000582772		A0A0G2JK05	382 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	CDRT15L2	A8MXV6	281 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	SPATA31C2	B4DYI2	1134 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	HAX1	O00165	279 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	VAMP4	O75379	141 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	STAM2	O75886	525 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	GJB6	O95452	261 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	MARK3	P27448	753 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms