RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 CD300LGQ6UXG3 332 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 TAS1R1Q7RTX1 841 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 VPS52Q8N1B4 723 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 SYAP1Q96A49 352 aaPredicted RBP13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 MRPL38Q96DV4 380 aaKnown RBP13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 EEF2KMTQ96G04 330 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 ANKRD36BP1Q96IX9 119 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 POP1Q99575 1024 aaKnown RBP13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 DUSP9Q99956 384 aaKnown RBP13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 INTS13Q9NVM9 706 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 STK39Q9UEW8 545 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 CTNND2Q9UQB3 1225 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 MTCH2Q9Y6C9 303 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 SZT2Q5T011 3432 aa13.03□□□□□ -0.32
SNRPD1-204ENST00000582475 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.32
SNRPD1-204ENST00000582475 TMEM189-UBE2V1I3L0A0 370 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 CSPG5O95196 566 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 KIF4AO95239 1232 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 CXCL14O95715 111 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 TMEM191BP0C7N4 346 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 IRS1P35568 1242 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 BMS1Q14692 1282 aaKnown RBP13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 C9orf57Q5W0N0 161 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 PDE12Q6L8Q7 609 aaKnown RBP13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 TTI2Q6NXR4 508 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 FOXR2Q6PJQ5 311 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 TMC7Q7Z402 723 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 WDR49Q8IV35 697 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 ZC3H3Q8IXZ2 948 aaKnown RBP13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 FAM186BQ8IYM0 893 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 CSGALNACT2Q8N6G5 542 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 PLEKHO2Q8TD55 490 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 PARD3BQ8TEW8 1205 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 HASPINQ8TF76 798 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 MKNK1Q9BUB5 465 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 VN1R3Q9BXE9 311 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 GPR62Q9BZJ7 368 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 TLR9Q9NR96 1032 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 DACH1Q9UI36 760 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 RWDD2AQ9UIY3 292 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 NUB1Q9Y5A7 615 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 RALGAPA2Q2PPJ7 1873 aa13.02□□□□□ -0.33
SNRPD1-204ENST00000582475 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 ANO9A1A5B4 782 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 PIRO00625 290 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 FSCN2O14926 492 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 TRAPPC3O43617 180 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 EFEMP2O95967 443 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 TNNC2P02585 160 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 SOD2P04179 222 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 CTSAP10619 480 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 EPB41P11171 864 aaKnown RBP13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 KRT13P13646 458 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 FOSL2P15408 326 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 BRCC3P46736 316 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 VAMP7P51809 220 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 ELAVL2Q12926 359 aaKnown RBP13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 NFKBIBQ15653 356 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 USP41Q3LFD5 358 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 DPCR1Q3MIW9 517 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 CT47A1Q5JQC4 288 aaPredicted RBP13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 INTS8Q75QN2 995 aaKnown RBP13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 RNF168Q8IYW5 571 aaPredicted RBP13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 C1orf127Q8N9H9 656 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 C3orf58Q8NDZ4 430 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 OR5B17Q8NGF7 314 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 CGRRF1Q99675 332 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 HERC2P3Q9BVR0 1158 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 SRRTQ9BXP5 876 aaKnown RBP13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 GZF1Q9H116 711 aaPredicted RBP13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 ENTPD7Q9NQZ7 604 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 AGAP1Q9UPQ3 857 aa13.01□□□□□ -0.33
SNRPD1-204ENST00000582475 CHD7Q9P2D1 2997 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 KIAA1671Q9BY89 1806 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.33
SNRPD1-204ENST00000582475 LRRIQ3A6PVS8 624 aaPredicted RBP13□□□□□ -0.33
SNRPD1-204ENST00000582475 PPEF2O14830 753 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 LETM1O95202 739 aaPredicted RBP13□□□□□ -0.33
SNRPD1-204ENST00000582475 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
SNRPD1-204ENST00000582475 C4BPAP04003 597 aaKnown RBP13□□□□□ -0.33
SNRPD1-204ENST00000582475 PAX3P23760 479 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 ERCC5P28715 1186 aaPredicted RBP13□□□□□ -0.33
SNRPD1-204ENST00000582475 AP3M2P53677 418 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 DLG4P78352 724 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 RBP5P82980 135 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 ENPEPQ07075 957 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 TIGD5Q53EQ6 642 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 FAM171A1Q5VUB5 890 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 PLPP4Q5VZY2 271 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 SCARA3Q6AZY7 606 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 KIAA1841Q6NSI8 718 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms