RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ARL2P36404 184 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 VIPR2P41587 438 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 KPNA1P52294 538 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-205ENST00000582331 CTTNQ14247 550 aaKnown RBP8.41□□□□□ -1.06
CCDC47-205ENST00000582331 DGKKQ5KSL6 1271 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 PSAPL1Q6NUJ1 521 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 ANKS3Q6ZW76 656 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 MFSD6LQ8IWD5 586 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 YAF2Q8IY57 180 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 BLIDQ8IZY5 108 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 ASAP3Q8TDY4 903 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 BRF1Q92994 677 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 DYDC2Q96IM9 177 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 ZSWIM3Q96MP5 696 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 C8orf33Q9H7E9 229 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-205ENST00000582331 RBM12Q9NTZ6 932 aaKnown RBP8.41□□□□□ -1.06
CCDC47-205ENST00000582331 SNTG2Q9NY99 539 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 SPEGQ15772 3267 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 ASPMQ8IZT6 3477 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 NID2Q14112 1375 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 HEPACAM2A8MVW5 462 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 TMEM189-UBE2V1I3L0A0 370 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 M0R2N6 131 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 DGAT1O75907 488 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 RECQL4O94761 1208 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 ABLIM3O94929 683 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 EPN2O95208 641 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 ATF2P15336 505 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 GLRA2P23416 452 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 IGFBP6P24592 240 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-205ENST00000582331 TKTP29401 623 aaKnown RBP8.4□□□□□ -1.06
CCDC47-205ENST00000582331 CCR2P41597 374 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 ARPP19P56211 112 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 ROR1Q01973 937 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 NAB2Q15742 525 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 INF2Q27J81 1249 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 RNF43Q68DV7 783 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 NCAPH2Q6IBW4 605 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 IQCEQ6IPM2 695 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 SLC8B1Q6J4K2 584 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 Q6ZS52 159 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 CACNA2D4Q7Z3S7 1137 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 KRT25Q7Z3Z0 450 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 TPH2Q8IWU9 490 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 ELMOD1Q8N336 334 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 ZSCAN18Q8TBC5 510 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-205ENST00000582331 GAB3Q8WWW8 586 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 E2F7Q96AV8 911 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 PRIMPOLQ96LW4 560 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 ZNF512Q96ME7 567 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-205ENST00000582331 GPR88Q9GZN0 384 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 CXCL16Q9H2A7 254 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 TRPV4Q9HBA0 871 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 CYP4F11Q9HBI6 524 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 KCNMB3Q9NPA1 279 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 ANKEF1Q9NU02 776 aa8.4□□□□□ -1.06
CCDC47-205ENST00000582331 PRMT7Q9NVM4 692 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-205ENST00000582331 FAM208BQ5VWN6 2430 aa8.4□□□□□ -1.07
CCDC47-205ENST00000582331 LAMA1P25391 3075 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 TICRRQ7Z2Z1 1910 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 TMEM8BA6NDV4 472 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 LRRIQ4A6NIV6 560 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 SLC38A8A6NNN8 435 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 SOBPA7XYQ1 873 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 I3L4J1 428 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 ARNTLO00327 626 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 N4BP3O15049 544 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 TBX3O15119 743 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 CHADO15335 359 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 MOSPD3O75425 235 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 RPP40O75818 363 aaKnown RBP8.39□□□□□ -1.07
CCDC47-205ENST00000582331 SLITRK3O94933 977 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 SEC24AO95486 1093 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 MYL4P12829 197 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 CPA1P15085 419 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 RAP1GAPP47736 663 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 RBM25P49756 843 aaKnown RBP8.39□□□□□ -1.07
CCDC47-205ENST00000582331 NOVA1P51513 510 aaKnown RBP8.39□□□□□ -1.07
CCDC47-205ENST00000582331 CLCNKBP51801 687 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 CYP4A11Q02928 519 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
CCDC47-205ENST00000582331 FOXC1Q12948 553 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 PLA2G2CQ5R387 149 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 PPP4R3AQ6IN85 833 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 GALNT17Q6IS24 598 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 CD300LGQ6UXG3 332 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 KBTBD6Q86V97 674 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 NOSTRINQ8IVI9 506 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 ZBTB8OSQ8IWT0 167 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 TRIM22Q8IYM9 498 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 TCEAL8Q8IYN2 117 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 SYNPOQ8N3V7 929 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 LEMD2Q8NC56 503 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 DAGLBQ8NCG7 672 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 FAM200AQ8TCP9 573 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 HAS1Q92839 578 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 CCDC43Q96MW1 224 aaKnown RBP8.39□□□□□ -1.07
CCDC47-205ENST00000582331 UROC1Q96N76 676 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms