RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TNNC2P02585 160 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 TMEM191BP0C7N4 346 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 PRMT2P55345 433 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 RNASE9P60153 205 aaKnown RBP24.23■■□□□ 1.47
CCDC47-204ENST00000582252 PTPROQ16827 1216 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 SEZ6Q53EL9 994 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 SPOPLQ6IQ16 392 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 TLK2Q86UE8 772 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 ANKRD36BP1Q96IX9 119 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 NUP85Q9BW27 656 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 CNTN6Q9UQ52 1028 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 KRIT1O00522 736 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 ZEB2O60315 1214 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 ZMYND10O75800 440 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 HEXIM1O94992 359 aaKnown RBP24.22■■□□□ 1.47
CCDC47-204ENST00000582252 MMP3P08254 477 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 ACO1P21399 889 aaKnown RBP24.22■■□□□ 1.47
CCDC47-204ENST00000582252 POU5F1Q01860 360 aaKnown RBP24.22■■□□□ 1.47
CCDC47-204ENST00000582252 TRPC3Q13507 836 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 DGKDQ16760 1214 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 KYAT1Q16773 422 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 SGSM1Q2NKQ1 1148 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 EMBQ6PCB8 327 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 RAET1EQ8TD07 263 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 FAM212AQ96EL1 285 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 WNT8AQ9H1J5 351 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 APOBEC3GQ9HC16 384 aaKnown RBP24.22■■□□□ 1.47
CCDC47-204ENST00000582252 AVENQ9NQS1 362 aaPredicted RBP24.22■■□□□ 1.47
CCDC47-204ENST00000582252 CENPFP49454 3210 aa24.22■■□□□ 1.47
CCDC47-204ENST00000582252 DYNC1LI2O43237 492 aaPredicted RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 B4GALT4O60513 344 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 ASS1P00966 412 aaKnown RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 SLC7A5Q01650 507 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 LINC01465Q8N7H1 131 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 AENQ8WTP8 325 aaKnown RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 HDAC7Q8WUI4 952 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 RPF1Q9H9Y2 349 aaKnown RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 CNOT8Q9UFF9 292 aaKnown RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 AKT3Q9Y243 479 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 GOLGA6L10A0A0M3HER8 536 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 A6NJR5 290 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 H3BRB1 525 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 UNGP13051 313 aaPredicted RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 GNA15P30679 374 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 NSFP46459 744 aaKnown RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 MESDQ14696 234 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 TMEM270Q6UE05 265 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 RBBP8NLQ8NC74 664 aaPredicted RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 TRPV1Q8NER1 839 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 ELMO3Q96BJ8 720 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 FAM84AQ96KN4 292 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 C16orf70Q9BSU1 422 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 MTMR12Q9C0I1 747 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 AP5M1Q9H0R1 490 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 SLITRK6Q9H5Y7 841 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 TUT1Q9H6E5 874 aaKnown RBP24.21■■□□□ 1.47
CCDC47-204ENST00000582252 GDF3Q9NR23 364 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 NUB1Q9Y5A7 615 aa24.21■■□□□ 1.47
CCDC47-204ENST00000582252 HMGCRP04035 888 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 ZNF286BP0CG31 522 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 MCF2P10911 925 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 OAS2P29728 719 aaKnown RBP24.2■■□□□ 1.46
CCDC47-204ENST00000582252 YWHAEP62258 255 aaKnown RBP24.2■■□□□ 1.46
CCDC47-204ENST00000582252 FAM193AP78312 1265 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 PAK2Q13177 524 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 HSP90B2PQ58FF3 399 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 THNSL1Q8IYQ7 743 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 CCDC26Q8TAB7 109 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 PXYLP1Q8TE99 480 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.2■■□□□ 1.46
CCDC47-204ENST00000582252 CDT1Q9H211 546 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 ANK1P16157 1881 aa24.2■■□□□ 1.46
CCDC47-204ENST00000582252 DUSP11O75319 330 aaKnown RBP24.19■■□□□ 1.46
CCDC47-204ENST00000582252 CYP1A1P04798 512 aaPredicted RBP24.19■■□□□ 1.46
CCDC47-204ENST00000582252 GJB1P08034 283 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 ELNP15502 786 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 CPT1AP50416 773 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 CENPCQ03188 943 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 NNTQ13423 1086 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 LIN9Q5TKA1 542 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 MTHFD1LQ6UB35 978 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 KLHL7Q8IXQ5 586 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 RNPC3Q96LT9 517 aaKnown RBP24.19■■□□□ 1.46
CCDC47-204ENST00000582252 ZSWIM1Q9BR11 485 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 NIF3L1Q9GZT8 377 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 IFT122Q9HBG6 1241 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 HTTP42858 3142 aa24.19■■□□□ 1.46
CCDC47-204ENST00000582252 CCDC66A2RUB6 948 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 TMEM110-MUSTN1A8MSY1 372 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 SEPT4O43236 478 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 TFAMQ00059 246 aaKnown RBP24.18■■□□□ 1.46
CCDC47-204ENST00000582252 CACNB2Q08289 660 aaPredicted RBP24.18■■□□□ 1.46
CCDC47-204ENST00000582252 PPFIA1Q13136 1202 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 MAATS1Q7Z4T9 603 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 MCOLN2Q8IZK6 566 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 EIF1ADQ8N9N8 165 aaKnown RBP24.18■■□□□ 1.46
CCDC47-204ENST00000582252 VCPIP1Q96JH7 1222 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 ATMINO43313 823 aaPredicted RBP24.18■■□□□ 1.46
CCDC47-204ENST00000582252 SPOPO43791 374 aa24.18■■□□□ 1.46
CCDC47-204ENST00000582252 FGGP02679 453 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms