RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 TNFSF9P41273 254 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 AARSP49588 968 aaKnown RBP eCLIP24.31■■□□□ 1.487e-10■■■■□ 22.7
CASC3-207ENST00000581849 SLC39A14Q15043 492 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 SPECC1Q5M775 1068 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 RRAGBQ5VZM2 374 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 CCDC73Q6ZRK6 1079 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 TCEAL8Q8IYN2 117 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 TMEM105Q8N8V8 129 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 RSAD2Q8WXG1 361 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 DDX12PQ92771 950 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 MSTO1Q9BUK6 570 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 FBXL5Q9UKA1 691 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 CPSF3Q9UKF6 684 aaKnown RBP24.31■■□□□ 1.48
CASC3-207ENST00000581849 POLIQ9UNA4 740 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 STYXL1Q9Y6J8 313 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 LACTBL1A8MY62 500 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 GAP43P17677 238 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 NMT1P30419 496 aaKnown RBP24.3■■□□□ 1.48
CASC3-207ENST00000581849 CTXN3Q4LDR2 81 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 PABPC1LQ4VXU2 614 aaKnown RBP24.3■■□□□ 1.48
CASC3-207ENST00000581849 CWF19L1Q69YN2 538 aaKnown RBP24.3■■□□□ 1.48
CASC3-207ENST00000581849 FAM173BQ6P4H8 233 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 SLC39A4Q6P5W5 647 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 MTSS1LQ765P7 747 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 SV2BQ7L1I2 683 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 FGF13Q92913 245 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 SNX21Q969T3 373 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 USP28Q96RU2 1077 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 SLC2A4RGQ9NR83 387 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 DERAQ9Y315 318 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 NOTCH4Q99466 2003 aa24.3■■□□□ 1.48
CASC3-207ENST00000581849 NARSO43776 548 aaKnown RBP24.29■■□□□ 1.48
CASC3-207ENST00000581849 PPP1R37O75864 691 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 PDIA4P13667 645 aaKnown RBP24.29■■□□□ 1.48
CASC3-207ENST00000581849 AOC1P19801 751 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 NASPP49321 788 aaPredicted RBP24.29■■□□□ 1.48
CASC3-207ENST00000581849 MRE11P49959 708 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 NTHL1P78549 312 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 ZNF720Q7Z2F6 126 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 ALYREFQ86V81 257 aaKnown RBP24.29■■□□□ 1.48
CASC3-207ENST00000581849 CLIC6Q96NY7 704 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 RTP3Q9BQQ7 232 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 ASB7Q9H672 318 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 DNMT3BQ9UBC3 853 aaKnown RBP24.29■■□□□ 1.48
CASC3-207ENST00000581849 NUMBLQ9Y6R0 609 aa24.29■■□□□ 1.48
CASC3-207ENST00000581849 OAZ2O95190 189 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 LRG1P02750 347 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 NPR3P17342 541 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 ZBTB41Q5SVQ8 909 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 SPATA1Q5VX52 437 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 SFR1Q86XK3 245 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 SIX5Q8N196 739 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 BEST2Q8NFU1 509 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 STRA6Q9BX79 667 aa24.28■■□□□ 1.48
CASC3-207ENST00000581849 AFF4Q9UHB7 1163 aaKnown RBP24.28■■□□□ 1.48
CASC3-207ENST00000581849 PRRG1O14668 218 aa24.27■■□□□ 1.48
CASC3-207ENST00000581849 CEBPZQ03701 1054 aaKnown RBP24.27■■□□□ 1.48
CASC3-207ENST00000581849 YWHAHQ04917 246 aaPredicted RBP24.27■■□□□ 1.48
CASC3-207ENST00000581849 SPAG1Q07617 926 aa24.27■■□□□ 1.48
CASC3-207ENST00000581849 POSTNQ15063 836 aa24.27■■□□□ 1.48
CASC3-207ENST00000581849 ZC2HC1CQ53FD0 456 aaPredicted RBP24.27■■□□□ 1.48
CASC3-207ENST00000581849 DYMQ7RTS9 669 aa24.27■■□□□ 1.48
CASC3-207ENST00000581849 DNAJC19Q96DA6 116 aa24.27■■□□□ 1.48
CASC3-207ENST00000581849 OLFML3Q9NRN5 406 aa24.27■■□□□ 1.48
CASC3-207ENST00000581849 C2CD2Q9Y426 696 aa24.27■■□□□ 1.48
CASC3-207ENST00000581849 MYH15Q9Y2K3 1946 aa24.27■■□□□ 1.48
CASC3-207ENST00000581849 MYMKA6NI61 221 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 MICAL2O94851 1124 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 CFHP08603 1231 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 PTPN2P17706 415 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 TYMPP19971 482 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 ALCAMQ13740 583 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 ADALQ6DHV7 355 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 NPAS3Q8IXF0 933 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 FLCNQ8NFG4 579 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 ITFG1Q8TB96 612 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 CYP4F11Q9HBI6 524 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 HCFC1R1Q9NWW0 138 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 GDE1Q9NZC3 331 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 AGO2Q9UKV8 859 aaKnown RBP24.26■■□□□ 1.47
CASC3-207ENST00000581849 EXOC7Q9UPT5 735 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 MRPS23Q9Y3D9 190 aaKnown RBP24.26■■□□□ 1.47
CASC3-207ENST00000581849 INSL5Q9Y5Q6 135 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 ANK1P16157 1881 aa24.26■■□□□ 1.47
CASC3-207ENST00000581849 OR6C75A6NL08 312 aa24.25■■□□□ 1.47
CASC3-207ENST00000581849 ANKRD63C9JTQ0 380 aa24.25■■□□□ 1.47
CASC3-207ENST00000581849 RHOP08100 348 aa24.25■■□□□ 1.47
CASC3-207ENST00000581849 STAT6P42226 847 aa24.25■■□□□ 1.47
CASC3-207ENST00000581849 ARPP19P56211 112 aa24.25■■□□□ 1.47
CASC3-207ENST00000581849 FGF14Q92915 247 aa24.25■■□□□ 1.47
CASC3-207ENST00000581849 MRPL44Q9H9J2 332 aaKnown RBP24.25■■□□□ 1.47
CASC3-207ENST00000581849 FRMD3A2A2Y4 597 aa24.24■■□□□ 1.47
CASC3-207ENST00000581849 PPP6R2O75170 966 aa24.24■■□□□ 1.47
CASC3-207ENST00000581849 SEC24AO95486 1093 aa24.24■■□□□ 1.47
CASC3-207ENST00000581849 TMEM132DQ14C87 1099 aa24.24■■□□□ 1.47
CASC3-207ENST00000581849 JADE1Q6IE81 842 aa24.24■■□□□ 1.47
CASC3-207ENST00000581849 PHLDB3Q6NSJ2 640 aa24.24■■□□□ 1.47
CASC3-207ENST00000581849 PARM1Q6UWI2 310 aa24.24■■□□□ 1.47
CASC3-207ENST00000581849 USP37Q86T82 979 aa24.24■■□□□ 1.47
CASC3-207ENST00000581849 NT5DC4Q86YG4 428 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms