RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	TATDN2	Q93075	761 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	TLR10	Q9BXR5	811 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	MIS12	Q9H081	205 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	UPF3A	Q9H1J1	476 aa	Known RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	PDZD7	Q9H5P4	517 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	ARFGAP3	Q9NP61	516 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	CTTNBP2NL	Q9P2B4	639 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	PUF60	Q9UHX1	559 aa	Known RBP	10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	PTPN22	Q9Y2R2	807 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	PTCH2	Q9Y6C5	1203 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	SCIN	Q9Y6U3	715 aa		10.62	□□□□□ -0.71
TRIM16-222	ENST00000581224	MROH7	Q68CQ1	1323 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	CCDC188	H7C350	402 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	RRP9	O43818	475 aa	Known RBP	10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	TSPAN1	O60635	241 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	CABYR	O75952	493 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	KIF4A	O95239	1232 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	CYP1A2	P05177	515 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	PAEP	P09466	180 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	DARS	P14868	501 aa	Known RBP	10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	ATF7	P17544	494 aa	Predicted RBP	10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	GNA15	P30679	374 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	POLR2B	P30876	1174 aa	Known RBP	10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	PRMT2	P55345	433 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	SNX16	P57768	344 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	TNNC1	P63316	161 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	ADAM17	P78536	824 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	TAP1	Q03518	808 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	PRKCZ	Q05513	592 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	TMEM132D	Q14C87	1099 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	STIL	Q15468	1287 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	CLEC16A	Q2KHT3	1053 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	GNAS	Q5JWF2	1037 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	PRAMEF19	Q5SWL8	479 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	NOP9	Q86U38	636 aa	Known RBP	10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	SLC47A2	Q86VL8	602 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	CREG2	Q8IUH2	290 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	LRRC57	Q8N9N7	239 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	ACTRT1	Q8TDG2	376 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	KAT2B	Q92831	832 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	SEZ6L	Q9BYH1	1024 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	TRIM6	Q9C030	488 aa	Predicted RBP	10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	WNT8A	Q9H1J5	351 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	ADAMTS10	Q9H324	1103 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	FLRT1	Q9NZU1	646 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	TFR2	Q9UP52	801 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	RALGAPA2	Q2PPJ7	1873 aa		10.61	□□□□□ -0.71
TRIM16-222	ENST00000581224	CCDC66	A2RUB6	948 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	LACTBL1	A8MY62	500 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	TMCO5B	A8MYB1	307 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	GPR32	O75388	356 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	CD4	P01730	458 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	EDN1	P05305	212 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	C6orf222	P0C671	652 aa	Predicted RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	PNMA6A	P0CW24	399 aa	Predicted RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	CYBA	P13498	195 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	H2AFX	P16104	143 aa	Predicted RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	CHRNB2	P17787	502 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	ACO1	P21399	889 aa	Known RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	PAX3	P23760	479 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	HOXC8	P31273	242 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	TNFSF9	P41273	254 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	SLC1A1	P43005	524 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	PURA	Q00577	322 aa	Known RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	FMO1	Q01740	532 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	CENPC	Q03188	943 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	PTPN11	Q06124	597 aa	Predicted RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	C1QBP	Q07021	282 aa	Known RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	CCL14	Q16627	93 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	WDR93	Q6P2C0	686 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	TMEM270	Q6UE05	265 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	RPAIN	Q86UA6	219 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	TMEM35B	Q8NCS4	154 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	BEST2	Q8NFU1	509 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	OR5B17	Q8NGF7	314 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	DDX1	Q92499	740 aa	Known RBP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	PKNOX2	Q96KN3	472 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	PI4K2A	Q9BTU6	479 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	PACSIN1	Q9BY11	444 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	MTMR12	Q9C0I1	747 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	CARD9	Q9H257	536 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	ACBD3	Q9H3P7	528 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	MINDY3	Q9H8M7	445 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	CHST12	Q9NRB3	414 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	SRRD	Q9UH36	339 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	SALL4	Q9UJQ4	1053 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	STRIP2	Q9ULQ0	834 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	GABRQ	Q9UN88	632 aa		10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
TRIM16-222	ENST00000581224	PGRMC1	O00264	195 aa	Known RBP	10.59	□□□□□ -0.71
TRIM16-222	ENST00000581224	KCNK3	O14649	394 aa		10.59	□□□□□ -0.71
TRIM16-222	ENST00000581224	TLR3	O15455	904 aa	Known RBP	10.59	□□□□□ -0.71
TRIM16-222	ENST00000581224	B4GALT5	O43286	388 aa		10.59	□□□□□ -0.71
TRIM16-222	ENST00000581224	THAP12	O43422	761 aa		10.59	□□□□□ -0.71
TRIM16-222	ENST00000581224	CYP1A1	P04798	512 aa	Predicted RBP	10.59	□□□□□ -0.71
TRIM16-222	ENST00000581224	CALB1	P05937	261 aa		10.59	□□□□□ -0.71
TRIM16-222	ENST00000581224	GJB1	P08034	283 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms