RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 CLDN3O15551 220 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 TBCAO75347 108 aaKnown RBP16.9■□□□□ 0.3
CCR7-203ENST00000579344 DLATP10515 647 aaKnown RBP16.9■□□□□ 0.3
CCR7-203ENST00000579344 VAV1P15498 845 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 CA4P22748 312 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 RPA3P35244 121 aaPredicted RBP16.9■□□□□ 0.3
CCR7-203ENST00000579344 CETN2P41208 172 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 ACTR3P61158 418 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 PABPC4Q13310 644 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCR7-203ENST00000579344 TNIP1Q15025 636 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 C6orf163Q5TEZ5 329 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 TBC1D9BQ66K14 1250 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 KLC3Q6P597 504 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 CHSY1Q86X52 802 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 PDCD7Q8N8D1 485 aaKnown RBP16.9■□□□□ 0.3
CCR7-203ENST00000579344 ZHX3Q9H4I2 956 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 SEPT11Q9NVA2 429 aaKnown RBP16.9■□□□□ 0.3
CCR7-203ENST00000579344 NDE1Q9NXR1 346 aa16.9■□□□□ 0.3
CCR7-203ENST00000579344 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 ITGA2BP08514 1039 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 TPP2P29144 1249 aaPredicted RBP16.89■□□□□ 0.29
CCR7-203ENST00000579344 RFC4P35249 363 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 CDK8P49336 464 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 USP4Q13107 963 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 R3HDM1Q15032 1099 aaKnown RBP16.89■□□□□ 0.29
CCR7-203ENST00000579344 CBWD6Q4V339 395 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 CBWD3Q5JTY5 395 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 CBWD5Q5RIA9 395 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 ARMC3Q5W041 872 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 IZUMO2Q6UXV1 221 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 STXBP4Q6ZWJ1 553 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 CATSPER3Q86XQ3 398 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
CCR7-203ENST00000579344 CCDC110Q8TBZ0 833 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 SLC20A1Q8WUM9 679 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 C1orf54Q8WWF1 131 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 GFM2Q969S9 779 aaKnown RBP16.89■□□□□ 0.29
CCR7-203ENST00000579344 NUP85Q9BW27 656 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 NPHS2Q9NP85 383 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 PSMC3IPQ9P2W1 217 aaPredicted RBP16.89■□□□□ 0.29
CCR7-203ENST00000579344 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.29
CCR7-203ENST00000579344 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCR7-203ENST00000579344 NUMBLQ9Y6R0 609 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 COL24A1Q17RW2 1714 aa16.89■□□□□ 0.29
CCR7-203ENST00000579344 TMEM110-MUSTN1A8MSY1 372 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 F5H6K3 240 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 PIK3CDO00329 1044 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 LRRN2O75325 713 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 SPAG7O75391 227 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 CAMTA2O94983 1202 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 UBTFL6P0CB48 400 aaPredicted RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 SPATA31C1P0DKV0 1188 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 ESRRAP11474 423 aaPredicted RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 KLRC2P26717 231 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 ADSSP30520 456 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 PGM1P36871 562 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 CDC16Q13042 620 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 KLF1Q13351 362 aaPredicted RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 THOC5Q13769 683 aaKnown RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 TBCCQ15814 346 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 CERKLQ49MI3 558 aaPredicted RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 DNAL1Q4LDG9 190 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 IZUMO3Q5VZ72 239 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 RINLQ6ZS11 566 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 SPATA24Q86W54 205 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 SYCP3Q8IZU3 236 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 COA7Q96BR5 231 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 DGCR14Q96DF8 476 aaKnown RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 FAM81BQ96LP2 452 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 CATSPER2Q96P56 530 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 RBM15Q96T37 977 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCR7-203ENST00000579344 ANKRD2Q9GZV1 360 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 CHST7Q9NS84 486 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 HEY2Q9UBP5 337 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 FRMD4BQ9Y2L6 1034 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 XIRP1Q702N8 1843 aaKnown RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 USP17L5A8MUK1 530 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 GCNT3O95395 438 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 RRM1P23921 792 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 NEK3P51956 506 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 ARFIP2P53365 341 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 ASPHQ12797 758 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 CETN1Q12798 172 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 EFHC2Q5JST6 749 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 MAP3K21Q5TCX8 1036 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 LVRNQ6Q4G3 990 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 POTEGQ6S5H5 508 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 TIMMDC1Q9NPL8 285 aa16.88■□□□□ 0.29
CCR7-203ENST00000579344 METTL5Q9NRN9 209 aaKnown RBP16.88■□□□□ 0.29
CCR7-203ENST00000579344 KLF11O14901 512 aa16.87■□□□□ 0.29
CCR7-203ENST00000579344 RGL2O15211 777 aa16.87■□□□□ 0.29
CCR7-203ENST00000579344 BUD23O43709 281 aaKnown RBP16.87■□□□□ 0.29
CCR7-203ENST00000579344 CIB2O75838 187 aa16.87■□□□□ 0.29
CCR7-203ENST00000579344 TM7SF2O76062 418 aa16.87■□□□□ 0.29
CCR7-203ENST00000579344 LDHCP07864 332 aa16.87■□□□□ 0.29
CCR7-203ENST00000579344 DBN1Q16643 649 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms