RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 DUSP15Q9H1R2 295 aaPredicted RBP12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 DNAJC25Q9H1X3 360 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 CRISPLD1Q9H336 500 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 GOLGA2P5Q9HBQ8 144 aa12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 HELZ2Q9BYK8 2649 aaKnown RBP12.35□□□□□ -0.43
SUPT4H1-203ENST00000579289 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 C4orf47A7E2U8 309 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 TBX3O15119 743 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 FOXC1Q12948 553 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 LRRC32Q14392 662 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 KRT32Q14532 448 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 TEAD2Q15562 447 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 INF2Q27J81 1249 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 EARS2Q5JPH6 523 aaKnown RBP12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 DGKKQ5KSL6 1271 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 STXBP5Q5T5C0 1151 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 Q6ZUG5 572 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 ANKS3Q6ZW76 656 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 CACNA2D4Q7Z3S7 1137 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 NOSTRINQ8IVI9 506 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 BSNDQ8WZ55 320 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 AIFM3Q96NN9 605 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 SLC26A6Q9BXS9 759 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 C8orf33Q9H7E9 229 aaPredicted RBP12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 ZSWIM4Q9H7M6 989 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 GPRC5CQ9NQ84 441 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 GTSE1Q9NYZ3 720 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
SUPT4H1-203ENST00000579289 A0A087WWV3 80 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 ZNF197O14709 1029 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 DKC1O60832 514 aaKnown RBP eCLIP12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 RPP40O75818 363 aaKnown RBP12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 AKAP3O75969 853 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 B3GAT3O94766 335 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 REC8O95072 547 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 RARRES1P49788 294 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 CYP4A11Q02928 519 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 ZNF252P-AS1Q0IIN9 211 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 PON2Q15165 354 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 RNF43Q68DV7 783 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 CEP68Q76N32 757 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 OTUD6AQ7L8S5 288 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 RALGPS2Q86X27 583 aaPredicted RBP12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 HACE1Q8IYU2 909 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 BLIDQ8IZY5 108 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 SYNPOQ8N3V7 929 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 C12orf50Q8NA57 414 aaPredicted RBP12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 BRF1Q92994 677 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 ZFYVE19Q96K21 471 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 JAKMIP1Q96N16 626 aaKnown RBP12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 ZMAT2Q96NC0 199 aaKnown RBP12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 VPS45Q9NRW7 570 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 FBXL5Q9UKA1 691 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 ADAMTS20P59510 1910 aa12.33□□□□□ -0.44
SUPT4H1-203ENST00000579289 LNP1A1A4G5 178 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 BCLAF3A2AJT9 711 aaKnown RBP12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 FAM221BA6H8Z2 402 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 OTOL1A6NHN0 477 aaPredicted RBP12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 DGAT1O75907 488 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 LRG1P02750 347 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 HMGB1P09429 215 aaKnown RBP12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 NLRP5P59047 1200 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 NCBP1Q09161 790 aaKnown RBP12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 TFDP1Q14186 410 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 GLRA4Q5JXX5 417 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 SH3PXD2AQ5TCZ1 1133 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 FSTL4Q6MZW2 842 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 PDZD4Q76G19 769 aaPredicted RBP12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 GPIHBP1Q8IV16 184 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 TMEM130Q8N3G9 435 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 TTC8Q8TAM2 541 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 EZH1Q92800 747 aaPredicted RBP12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 C22orf23Q9BZE7 217 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 FBRSL1Q9HCM7 1045 aaKnown RBP12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 ANKEF1Q9NU02 776 aa12.32□□□□□ -0.44
SUPT4H1-203ENST00000579289 NUP210Q8TEM1 1887 aaPredicted RBP12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 SMIM28A0A1B0GU29 152 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 DCLK1O15075 740 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 PRKCBP05771 671 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 CEACAM1P13688 526 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 CSRP1P21291 193 aaKnown RBP12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 TNK2Q07912 1038 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 TWF1Q12792 350 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 NT5DC1Q5TFE4 455 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 TPGS2Q68CL5 300 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 C1orf228Q6PIY5 440 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 GAREM2Q75VX8 874 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 POTEDQ86YR6 584 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 EDEM2Q9BV94 578 aa12.31□□□□□ -0.44
SUPT4H1-203ENST00000579289 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms