RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 NCKAP1LP55160 1127 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SNAP47Q5SQN1 464 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 FAM162AQ96A26 154 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SPOCK3Q9BQ16 436 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 C11orf70Q9BRQ4 267 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TSEN34Q9BSV6 310 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 SCN3BQ9NY72 215 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 ZC3H7BQ9UGR2 993 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 WBP11Q9Y2W2 641 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 NRKQ7Z2Y5 1582 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SAGE2PA6NJ88 616 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 EVPLLA8MZ36 301 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SRP72O76094 671 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 FGAP02671 866 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 VDRP11473 427 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SLC16A1P53985 500 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 GPC5P78333 572 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TTLL4Q14679 1199 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TAB1Q15750 504 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 AASDHQ4L235 1098 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 COBLL1Q53SF7 1204 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 C6orf10Q5SRN2 563 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TUBA3EQ6PEY2 450 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 C11orf96Q7Z7L8 435 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 CDR2LQ86X02 465 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 FOXP4Q8IVH2 680 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 RTKN2Q8IZC4 609 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 CLEC4FQ8N1N0 589 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 KCNV2Q8TDN2 545 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 MAGEB10Q96LZ2 347 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 GOLPH3LQ9H4A5 285 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 FAM217BQ9NTX9 383 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 PNMA6EA0A0J9YXQ4 647 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TK2O00142 265 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TRAPPC3O43617 180 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 DYRK3O43781 588 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 ALOX15P16050 662 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 KCNA6P17658 529 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 RXRBP28702 533 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 GRIK1P39086 918 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 PRIM2P49643 509 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 HSD17B4P51659 736 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 DYNLL1P63167 89 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 NKX1-1Q15270 411 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 ZNF544Q6NX49 715 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 IYDQ6PHW0 289 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 KLHL24Q6TFL4 600 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 C11orf74Q86VG3 221 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 ZNF341Q9BYN7 854 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 QTRT2Q9H974 415 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 SPACA6W5XKT8 324 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 hCG_2014768A0A024R1R8 64 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 F8W810 466 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 PDIA3P30101 505 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 CSE1LP55060 971 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 SNAP25P60880 206 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 CPSF1Q10570 1443 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 DPYDQ12882 1025 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 ARMCX4Q5H9R4 360 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TRAF7Q6Q0C0 670 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 NT5DC4Q86YG4 428 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 FAM81AQ8TBF8 368 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 APOL4Q9BPW4 351 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 FAM124BQ9H5Z6 455 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 NOL6Q9H6R4 1146 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 MYO5CQ9NQX4 1742 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 RPS6KB2Q9UBS0 482 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 RGS2P41220 211 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 ACTR2P61160 394 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SLC7A5Q01650 507 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SHROOM1Q2M3G4 852 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 TMEM270Q6UE05 265 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SMYD4Q8IYR2 804 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 NUP93Q8N1F7 819 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 UBE2J2Q8N2K1 259 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 PDPRQ8NCN5 879 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 FAM213AQ9BRX8 229 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SLC13A1Q9BZW2 595 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 NDST4Q9H3R1 872 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 KRCC1Q9NPI7 259 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 ZNF302Q9NR11 478 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 DCTN4Q9UJW0 460 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 MAN1B1Q9UKM7 699 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SYNGAP1Q96PV0 1343 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 CFAP99D6REC4 459 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 CES2O00748 559 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 SRGAP2O75044 1071 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 NDUFS3O75489 264 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 PDHA1P08559 390 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TBXAS1P24557 533 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 PDIA2Q13087 525 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 SLC39A14Q15043 492 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 PROM2Q8N271 834 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 RAET1EQ8TD07 263 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 CAPSLQ8WWF8 208 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 PRPF18Q99633 342 aaKnown RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 USP44Q9H0E7 712 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 NSMCE4AQ9NXX6 385 aa5.36□□□□□ -1.55
NF1-219ENST00000579081 TTC7AQ9ULT0 858 aaPredicted RBP5.36□□□□□ -1.55
NF1-219ENST00000579081 SH3BP1Q9Y3L3 701 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms