RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 GLYCTKQ8IVS8 523 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 CD302Q8IX05 232 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 MNS1Q8NEH6 495 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 LNX1Q8TBB1 728 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-218ENST00000578469 ACAP3Q96P50 834 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 SYT11Q9BT88 431 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 CCDC94Q9BW85 323 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-218ENST00000578469 ASB7Q9H672 318 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 NENFQ9UMX5 172 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 DUSP10Q9Y6W6 482 aa18.19■□□□□ 0.5
SREBF1-218ENST00000578469 TTC28Q96AY4 2481 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 EYSQ5T1H1 3165 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 DYNC1I1O14576 645 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 CYP26A1O43174 497 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 MOCS3O95396 460 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 PGK1P00558 417 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 CLTBP09497 229 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 CXCL8P10145 99 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 EIF4BP23588 611 aaKnown RBP18.18■□□□□ 0.5
SREBF1-218ENST00000578469 PDE6CP51160 858 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 CRYBB1P53674 252 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-218ENST00000578469 CUL2Q13617 745 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 NOTUMQ6P988 496 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 CXCL17Q6UXB2 119 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 RNF180Q86T96 592 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 RSPH3Q86UC2 560 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 RPUSD2Q8IZ73 545 aaKnown RBP18.18■□□□□ 0.5
SREBF1-218ENST00000578469 CEP120Q8N960 986 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 OSMRQ99650 979 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 MTMR12Q9C0I1 747 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 CDC23Q9UJX2 597 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 MRFAP1Q9Y605 127 aa18.18■□□□□ 0.5
SREBF1-218ENST00000578469 M0QZ92 97 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 GRM5P41594 1212 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 NOP14P78316 857 aaKnown RBP18.17■□□□□ 0.5
SREBF1-218ENST00000578469 TLE2Q04725 743 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 HIC1Q14526 733 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 NBPF20Q3BBV1 942 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 SLC27A1Q6PCB7 646 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 NT5DC4Q86YG4 428 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 PCSK9Q8NBP7 692 aaKnown RBP18.17■□□□□ 0.5
SREBF1-218ENST00000578469 PPP1R13LQ8WUF5 828 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 TAF4BQ92750 862 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 FAM84AQ96KN4 292 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 TTYH1Q9H313 450 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-218ENST00000578469 PHF24Q9UPV7 400 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 JRKLQ9Y4A0 524 aa18.17■□□□□ 0.5
SREBF1-218ENST00000578469 A0A0A6YYK5 440 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-218ENST00000578469 TRIM43BA6NCK2 446 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 LACTBL1A8MY62 500 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 CTIFO43310 598 aaKnown RBP18.16■□□□□ 0.5
SREBF1-218ENST00000578469 ADAMTS4O75173 837 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 ASS1P00966 412 aaKnown RBP18.16■□□□□ 0.5
SREBF1-218ENST00000578469 CYP11B1P15538 503 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 RAG1P15918 1043 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 FGFR4P22455 802 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 CST5P28325 142 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-218ENST00000578469 ZNF200P98182 395 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-218ENST00000578469 FAM47CQ5HY64 1035 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 ZNF677Q86XU0 584 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 EFCAB13Q8IY85 973 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 EPS8L1Q8TE68 723 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 CTNNBL1Q8WYA6 563 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-218ENST00000578469 TRIM43Q96BQ3 446 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-218ENST00000578469 PACSIN1Q9BY11 444 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 GTF2IRD1Q9UHL9 959 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 NOCTQ9UK39 431 aaKnown RBP18.16■□□□□ 0.5
SREBF1-218ENST00000578469 MROH7Q68CQ1 1323 aa18.16■□□□□ 0.5
SREBF1-218ENST00000578469 BUB1O43683 1085 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 NPTXRO95502 500 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 TMEM253P0C7T8 217 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 NOP2P46087 812 aaKnown RBP18.15■□□□□ 0.5
SREBF1-218ENST00000578469 YARSP54577 528 aaKnown RBP18.15■□□□□ 0.5
SREBF1-218ENST00000578469 GALCP54803 685 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 MYL6P60660 151 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 YWHAEP62258 255 aaKnown RBP18.15■□□□□ 0.5
SREBF1-218ENST00000578469 CDR2Q01850 454 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 FPGSQ05932 587 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 WHAMMP3Q1A5X7 153 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 ZNF699Q32M78 642 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 PAPD7Q5XG87 772 aaKnown RBP18.15■□□□□ 0.5
SREBF1-218ENST00000578469 SPOPLQ6IQ16 392 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 NOP9Q86U38 636 aaKnown RBP18.15■□□□□ 0.5
SREBF1-218ENST00000578469 CEP112Q8N8E3 955 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 KLHDC9Q8NEP7 349 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 SLC20A1Q8WUM9 679 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 FAXDC2Q96IV6 333 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 CARD6Q9BX69 1037 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 PLEKHA5Q9HAU0 1116 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 CDHR5Q9HBB8 845 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 APOBEC3GQ9HC16 384 aaKnown RBP18.15■□□□□ 0.5
SREBF1-218ENST00000578469 NUB1Q9Y5A7 615 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 PCDHB4Q9Y5E5 795 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 PCDHB2Q9Y5E7 798 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 CAPN6Q9Y6Q1 641 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 PRUNE2Q8WUY3 3088 aa18.15■□□□□ 0.5
SREBF1-218ENST00000578469 CDH23Q9H251 3354 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 PQBP1O60828 265 aaKnown RBP18.14■□□□□ 0.49
SREBF1-218ENST00000578469 RTN2O75298 545 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms