RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 PDZD8Q8NEN9 1154 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 ABTB1Q969K4 478 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 MED15Q96RN5 788 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 ZNF70Q9UC06 446 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 L3MBTL1Q9Y468 752 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 SKAP2O75563 359 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 DGAT1O75907 488 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 NUMBP49757 651 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 FAM71DQ8N9W8 422 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 ACAP3Q96P50 834 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 MKNK1Q9BUB5 465 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 DDX20Q9UHI6 824 aaKnown RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 MYCP01106 439 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 PYGMP11217 842 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 SHMT1P34896 483 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 FUT2Q10981 343 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 NR1H3Q13133 447 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 SPATA18Q8TC71 538 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 SKA2Q8WVK7 121 aaPredicted RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 SENP7Q9BQF6 1050 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 MRPL4Q9BYD3 311 aaKnown RBP12.7□□□□□ -0.38
ERBB2-206ENST00000578373 FGFBP2Q9BYJ0 223 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 BCAP29Q9UHQ4 241 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 HAO1Q9UJM8 370 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 AGAP1Q9UPQ3 857 aa12.7□□□□□ -0.38
ERBB2-206ENST00000578373 PDGFRBP09619 1106 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 LCP1P13796 627 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 CYP11B1P15538 503 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 CBWD6Q4V339 395 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 CBWD3Q5JTY5 395 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 CBWD5Q5RIA9 395 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 HEATR6Q6AI08 1181 aaKnown RBP12.69□□□□□ -0.38
ERBB2-206ENST00000578373 MORC4Q8TE76 937 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 RUBCNQ92622 972 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 RIC1Q4ADV7 1423 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 NEMP1O14524 444 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 KRT4P19013 534 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 CDC25CP30307 473 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 SOX11P35716 441 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 OCRLQ01968 901 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 POLR3CQ9BUI4 534 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-206ENST00000578373 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 hCG_2014768A0A024R1R8 64 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 THOC5Q13769 683 aaKnown RBP12.69□□□□□ -0.38
ERBB2-206ENST00000578373 SLC10A5Q5PT55 438 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 IL31Q6EBC2 164 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 PID1Q7Z2X4 250 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 SAMD7Q7Z3H4 446 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 LRGUKQ96M69 825 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 TSSK1BQ9BXA7 367 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 TMEM8AQ9HCN3 771 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 PCMTD2Q9NV79 361 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 XPO7Q9UIA9 1087 aaKnown RBP12.69□□□□□ -0.38
ERBB2-206ENST00000578373 STRIP2Q9ULQ0 834 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 FAF1Q9UNN5 650 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-206ENST00000578373 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.69□□□□□ -0.38
ERBB2-206ENST00000578373 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 CLGNO14967 610 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 ZNF263O14978 683 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 PFDN1O60925 122 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-206ENST00000578373 DALRD3Q5D0E6 543 aaKnown RBP12.69□□□□□ -0.38
ERBB2-206ENST00000578373 ENOSF1Q7L5Y1 443 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 ACTRT1Q8TDG2 376 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 HAS1Q92839 578 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 SPATA33Q96N06 139 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 THTPAQ9BU02 230 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 HOXC10Q9NYD6 342 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 ANGPTL2Q9UKU9 493 aa12.69□□□□□ -0.38
ERBB2-206ENST00000578373 A8MXQ7 604 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 EIF3DO15371 548 aaKnown RBP eCLIP12.68□□□□□ -0.381e-9■□□□□ 8
ERBB2-206ENST00000578373 GYS1P13807 737 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 YY1P25490 414 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 AMPD2Q01433 879 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 DAB2IPQ5VWQ8 1189 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 LRRC55Q6ZSA7 311 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 SV2AQ7L0J3 742 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 ARHGEF19Q8IW93 802 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 EMC1Q8N766 993 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 TRIM56Q9BRZ2 755 aaKnown RBP12.68□□□□□ -0.38
ERBB2-206ENST00000578373 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
ERBB2-206ENST00000578373 Q9H521 79 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 AIPL1Q9NZN9 384 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 TBX20Q9UMR3 447 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 SUGT1Q9Y2Z0 365 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 PRKCBP05771 671 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 SREBF1P36956 1147 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 RPL21P46778 160 aaKnown RBP12.68□□□□□ -0.38
ERBB2-206ENST00000578373 TSTA3Q13630 321 aaPredicted RBP12.68□□□□□ -0.38
ERBB2-206ENST00000578373 SURF1Q15526 300 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 MROH9Q5TGP6 573 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 KRT80Q6KB66 452 aa12.68□□□□□ -0.38
ERBB2-206ENST00000578373 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms