RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 FGBP02675 491 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 FAM163BP0C2L3 166 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 POLR2BP30876 1174 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 HNRNPH3P31942 346 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 DEKP35659 375 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 FXR1P51114 621 aaKnown RBP eCLIP18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 YWHAEP62258 255 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 NOP14P78316 857 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 ZNF699Q32M78 642 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 ZNF667Q5HYK9 610 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 GLRA4Q5JXX5 417 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 C9orf57Q5W0N0 161 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 TC2NQ8N9U0 490 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 CCDC112Q8NEF3 446 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 HELQQ8TDG4 1101 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 HPDLQ96IR7 371 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 DNAJC7Q99615 494 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 MRPL9Q9BYD2 267 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 XYLT2Q9H1B5 865 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 MIOSQ9NXC5 875 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 PLAGL2Q9UPG8 496 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 NR2E3Q9Y5X4 410 aa18.22■□□□□ 0.51
CDK5RAP3-207ENST00000578134 STAT1P42224 750 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 SCNN1GP51170 649 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 TUSC3Q13454 348 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 NAB2Q15742 525 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 IQCEQ6IPM2 695 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 PSRC1Q6PGN9 363 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 RRAGAQ7L523 313 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 LRRC8AQ8IWT6 810 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 PPM1KQ8N3J5 372 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 BAP1Q92560 729 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 DPF3Q92784 378 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 BADQ92934 168 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 TOP1MTQ969P6 601 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 C18orf25Q96B23 403 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 LBHD1Q9BQE6 289 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 NIF3L1Q9GZT8 377 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 CYP3A43Q9HB55 503 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 NLRC4Q9NPP4 1024 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 AIPL1Q9NZN9 384 aa18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 BZW2Q9Y6E2 419 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-207ENST00000578134 SCN5AQ14524 2016 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 EPHB6O15197 1021 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 KCNJ6P48051 423 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 ADKP55263 362 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 JAM2P57087 298 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 CDK17Q00537 523 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 LRMPQ12912 555 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 CUL2Q13617 745 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 SV2CQ496J9 727 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 CLLU1OSQ5K130 101 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 SFMBT2Q5VUG0 894 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 PDXDC1Q6P996 788 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 DPH6Q7L8W6 267 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 TNS4Q8IZW8 715 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 TATDN2Q93075 761 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 FAM193BQ96PV7 902 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 PI4K2AQ9BTU6 479 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 CXCL16Q9H2A7 254 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 ABHD10Q9NUJ1 306 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 TUBGCP4Q9UGJ1 667 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 FHOD1Q9Y613 1164 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 TTC3P53804 2025 aa18.2■□□□□ 0.5
CDK5RAP3-207ENST00000578134 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 ARHGEF37A1IGU5 675 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 FERP16591 822 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 TAF6P49848 677 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 RAPGEF1Q13905 1077 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 DRAP1Q14919 205 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 WDR72Q3MJ13 1102 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 DCLRE1AQ6PJP8 1040 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 ARHGEF19Q8IW93 802 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 CASD1Q96PB1 797 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 DNAI2Q9GZS0 605 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 MTIF3Q9H2K0 278 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 RNF19AQ9NV58 838 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 GDAP2Q9NXN4 497 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 INPP5FQ9Y2H2 1132 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 NUB1Q9Y5A7 615 aa18.19■□□□□ 0.5
CDK5RAP3-207ENST00000578134 PDCD11Q14690 1871 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 LRRC53A6NM62 1247 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 RNF225M0QZC1 329 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 LRRN2O75325 713 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 DGKIO75912 1065 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 POMCP01189 267 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 FGFR1P11362 822 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 IBSPP21815 317 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 FECHP22830 423 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 SOX5P35711 763 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 BPIFB4P59827 614 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 WDR5P61964 334 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 TNNC1P63316 161 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 RNASELQ05823 741 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 SOX4Q06945 474 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 DSC1Q08554 894 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 UPP1Q16831 310 aa18.18■□□□□ 0.5
CDK5RAP3-207ENST00000578134 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.18■□□□□ 0.51e-10■■■■■ 46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms