RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 TMEM119Q4V9L6 283 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 ATP13A4Q4VNC1 1196 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 PITRM1Q5JRX3 1037 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 GJC2Q5T442 439 aaPredicted RBP3.55□□□□□ -1.84
TOP2A-202ENST00000577541 SDE2Q6IQ49 451 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 GIMAP6Q6P9H5 292 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 COLGALT2Q8IYK4 626 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 SLC35B2Q8TB61 432 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 LEO1Q8WVC0 666 aaPredicted RBP3.55□□□□□ -1.84
TOP2A-202ENST00000577541 CASKIN2Q8WXE0 1202 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 WBP1Q96G27 269 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 TTC1Q99614 292 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 KCNE5Q9UJ90 142 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 CDY2AQ9Y6F7 541 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 AATKQ6ZMQ8 1374 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 LCHNA4D1U4 455 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 NEMP1O14524 444 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 YY2O15391 372 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 MPPED1O15442 326 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 EYA4O95677 639 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 FGFR4P22455 802 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 MPGP29372 298 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 SREBF1P36956 1147 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 MMP13P45452 471 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 UBE3CQ15386 1083 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 MFSD14BQ5SR56 506 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 SUMO4Q6EEV6 95 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 SLC18B1Q6NT16 456 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 MED25Q71SY5 747 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 DDX46Q7L014 1031 aaKnown RBP3.54□□□□□ -1.84
TOP2A-202ENST00000577541 KRT26Q7Z3Y9 468 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 CLRN3Q8NCR9 226 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 SSH3Q8TE77 659 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 NSMCE1Q8WV22 266 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 USP7Q93009 1102 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 FUBP3Q96I24 572 aaKnown RBP eCLIP3.54□□□□□ -1.846e-7■■■■□ 19.4
TOP2A-202ENST00000577541 TMEM79Q9BSE2 394 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 PRDM12Q9H4Q4 367 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 SCOCQ9UIL1 159 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 KCNG1Q9UIX4 513 aa3.54□□□□□ -1.84
TOP2A-202ENST00000577541 PNPLA7Q6ZV29 1317 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 WNT10BO00744 389 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 GPANK1O95872 356 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 GASTP01350 101 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 ENPP1P22413 925 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 XPAP23025 273 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-202ENST00000577541 SFPQP23246 707 aaKnown RBP eCLIP3.53□□□□□ -1.84
TOP2A-202ENST00000577541 SOX5P35711 763 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 MASP1P48740 699 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 HSD11B2P80365 405 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 MRPS9P82933 396 aaKnown RBP3.53□□□□□ -1.84
TOP2A-202ENST00000577541 PPARAQ07869 468 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 FAPQ12884 760 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 LMBR1LQ6UX01 489 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 ZNF66Q6ZN08 573 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 STRA8Q7Z7C7 330 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 ACRBPQ8NEB7 543 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 MDM1Q8TC05 714 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 SNX33Q8WV41 574 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 QTRT1Q9BXR0 403 aaKnown RBP3.53□□□□□ -1.84
TOP2A-202ENST00000577541 KCTD10Q9H3F6 313 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 TOPORSQ9NS56 1045 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-202ENST00000577541 TXLNGQ9NUQ3 528 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 TUBA8Q9NY65 449 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-202ENST00000577541 USP18Q9UMW8 372 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 NOC2LQ9Y3T9 749 aaKnown RBP3.53□□□□□ -1.84
TOP2A-202ENST00000577541 PRKAB1Q9Y478 270 aa3.53□□□□□ -1.84
TOP2A-202ENST00000577541 PRSS44E7EML9 344 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 PJA2O43164 708 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 RAB11FIP3O75154 756 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 CTSSP25774 331 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 CRHR1P34998 444 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 CLRN1P58418 232 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 MGAT5Q09328 741 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 SF3B3Q15393 1217 aaKnown RBP3.52□□□□□ -1.85
TOP2A-202ENST00000577541 MST1LQ2TV78 715 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 ANO4Q32M45 955 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 SUPT20HL1Q3ZLR7 823 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 DGKKQ5KSL6 1271 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 FOXR2Q6PJQ5 311 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 PDZD4Q76G19 769 aaPredicted RBP3.52□□□□□ -1.85
TOP2A-202ENST00000577541 KCNK18Q7Z418 384 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 CHAC2Q8WUX2 184 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 LMBR1Q8WVP7 490 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 TFAP2BQ92481 460 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 RAX2Q96IS3 184 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 ANO3Q9BYT9 981 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 VPS16Q9H269 839 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 PADI4Q9UM07 663 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 PROCRQ9UNN8 238 aa3.52□□□□□ -1.85
TOP2A-202ENST00000577541 MTO1Q9Y2Z2 717 aaKnown RBP3.52□□□□□ -1.85
TOP2A-202ENST00000577541 FNDC1Q4ZHG4 1894 aaPredicted RBP3.52□□□□□ -1.85
TOP2A-202ENST00000577541 PPP6CO00743 305 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 PHF2O75151 1096 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 ERN1O75460 977 aaKnown RBP3.51□□□□□ -1.85
TOP2A-202ENST00000577541 ITGA10O75578 1167 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 PRSS23O95084 383 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 ID4P47928 161 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 RABEP1Q15276 862 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.51□□□□□ -1.854e-17■■■□□ 17.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms