RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 TULP1O00294 542 aaPredicted RBP21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 BRCC3P46736 316 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 AARSP49588 968 aaKnown RBP eCLIP21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 ENPEPQ07075 957 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 KIAA0319Q5VV43 1072 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 TMC7Q7Z402 723 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 FAM186BQ8IYM0 893 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 HERC2P3Q9BVR0 1158 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 MTMR12Q9C0I1 747 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 SIX4Q9UIU6 781 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 STXBP5LQ9Y2K9 1186 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 SF3B1O75533 1304 aaKnown RBP eCLIP21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 XIRP2A4UGR9 3374 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 TNNI1P19237 187 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 LILRA4P59901 499 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 TIGD5Q53EQ6 642 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 INTS8Q75QN2 995 aaKnown RBP21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 FILIP1Q7Z7B0 1213 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 MICAL1Q8TDZ2 1067 aa21.62■■□□□ 1.05
SUPT4H1-202ENST00000577396 HIDE1A8MVS5 230 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 IKBKBO14920 756 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 SPTLC1O15269 473 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 CSPG5O95196 566 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 CXCL14O95715 111 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 FGFR3P22607 806 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 ELAVL2Q12926 359 aaKnown RBP21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 ATG2AQ2TAZ0 1938 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 USP41Q3LFD5 358 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 TRAPPC11Q7Z392 1133 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 CSGALNACT2Q8N6G5 542 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 AUTS2Q8WXX7 1259 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 ANKRD36BP1Q96IX9 119 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 B3GALT6Q96L58 329 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 CEP63Q96MT8 703 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 ITGA11Q9UKX5 1188 aa21.61■■□□□ 1.05
SUPT4H1-202ENST00000577396 SCN1AP35498 2009 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 C2orf71A6NGG8 1288 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 I3L4J1 428 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 SLC16A3O15427 465 aaKnown RBP21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 CST3P01034 146 aaPredicted RBP21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 C4BPAP04003 597 aaKnown RBP21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 ITGB3P05106 788 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 TMEM191BP0C7N4 346 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 ERCC5P28715 1186 aaPredicted RBP21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 VAMP7P51809 220 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 DSG1Q02413 1049 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 PTPN14Q15678 1187 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 CT47A1Q5JQC4 288 aaPredicted RBP21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 FAM171A1Q5VUB5 890 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 ADGRD2Q7Z7M1 963 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 GPR65Q8IYL9 337 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 SUSD3Q96L08 255 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 NSUN3Q9H649 340 aaKnown RBP21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 ENTPD7Q9NQZ7 604 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 NUB1Q9Y5A7 615 aa21.6■■□□□ 1.05
SUPT4H1-202ENST00000577396 M0QZQ0 153 aa21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 TRAPPC3O43617 180 aa21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 TNNC2P02585 160 aa21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 BFSP1Q12934 665 aa21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 SMC1AQ14683 1233 aaKnown RBP21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 RTP2Q5QGT7 225 aa21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 PLPP4Q5VZY2 271 aa21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 SYAP1Q96A49 352 aaPredicted RBP21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 AGAP1Q9UPQ3 857 aa21.59■■□□□ 1.05
SUPT4H1-202ENST00000577396 EPB41P11171 864 aaKnown RBP21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 PAX3P23760 479 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 POLR2BP30876 1174 aaKnown RBP21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 GLUD2P49448 558 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 AP3M2P53677 418 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 RBP5P82980 135 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 NFKBIBQ15653 356 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 SKOR2Q2VWA4 1001 aaPredicted RBP21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 TCEAL5Q5H9L2 206 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 SASS6Q6UVJ0 657 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 C15orf39Q6ZRI6 1047 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 TTPALQ9BTX7 342 aa21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 SRRTQ9BXP5 876 aaKnown RBP21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 MRPL17Q9NRX2 175 aaKnown RBP21.58■■□□□ 1.05
SUPT4H1-202ENST00000577396 PPP3CAQ08209 521 aa21.58■■□□□ 1.04
SUPT4H1-202ENST00000577396 LRRC52Q8N7C0 313 aa21.58■■□□□ 1.04
SUPT4H1-202ENST00000577396 LNX1Q8TBB1 728 aaPredicted RBP21.58■■□□□ 1.04
SUPT4H1-202ENST00000577396 RXFP1Q9HBX9 757 aa21.58■■□□□ 1.04
SUPT4H1-202ENST00000577396 DACH1Q9UI36 760 aa21.58■■□□□ 1.04
SUPT4H1-202ENST00000577396 VWA8A3KMH1 1905 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 KRT13P13646 458 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 TKTP29401 623 aaKnown RBP21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 TAF6P49848 677 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 MRPL58Q14197 206 aaKnown RBP21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 BMS1Q14692 1282 aaKnown RBP21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 ZACNQ401N2 412 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 TDRD10Q5VZ19 366 aaKnown RBP21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 KIAA1841Q6NSI8 718 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 SV2AQ7L0J3 742 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 FRMD5Q7Z6J6 570 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 USP37Q86T82 979 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 CEP57Q86XR8 500 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 PIK3R5Q8WYR1 880 aa21.57■■□□□ 1.04
SUPT4H1-202ENST00000577396 C2CD2LO14523 706 aa21.56■■□□□ 1.04
SUPT4H1-202ENST00000577396 SYN3O14994 580 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms