RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MFSD6LQ8IWD5 586 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 FAM160A2Q8N612 972 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 CEP120Q8N960 986 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 MCPH1Q8NEM0 835 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 DEPTORQ8TB45 409 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 TNFRSF25Q93038 417 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 UROC1Q96N76 676 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 ZMAT2Q96NC0 199 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 MTMR9Q96QG7 549 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 IER2Q9BTL4 223 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 PDRG1Q9NUG6 133 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 FBXL5Q9UKA1 691 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 ANGPTL2Q9UKU9 493 aa11.12□□□□□ -0.63
NPLOC4-220ENST00000576940 SLC38A8A6NNN8 435 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 PODXLO00592 558 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 TM4SF5O14894 197 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 FDPSP14324 419 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 PMLP29590 882 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 CNR2P34972 360 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 KRT2P35908 639 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 SF3A2Q15428 464 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 DCAF4L1Q3SXM0 396 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 ATF7IP2Q5U623 682 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 TXNDC11Q6PKC3 985 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 ALKAL1Q6UXT8 129 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 CEP68Q76N32 757 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 CSGALNACT1Q8TDX6 532 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 DEPDC1BQ8WUY9 529 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 LRRC3BQ96PB8 259 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 ARRDC1-AS1Q9H2J1 176 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 TMEM60Q9H2L4 133 aa11.11□□□□□ -0.63
NPLOC4-220ENST00000576940 COL4A2P08572 1712 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 BTBD18B2RXH4 712 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 H7C4K7 107 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 CDKL5O76039 1030 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 CYP11B2P19099 503 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 NAMPTP43490 491 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 PXNP49023 591 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 KPNA1P52294 538 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 AASDHQ4L235 1098 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 CTXN3Q4LDR2 81 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 XKR4Q5GH76 650 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 RNF19BQ6ZMZ0 732 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 YAF2Q8IY57 180 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 ELMOD1Q8N336 334 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 SHKBP1Q8TBC3 707 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 DDX1Q92499 740 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 C18orf25Q96B23 403 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 ZFYVE19Q96K21 471 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 TRPV4Q9HBA0 871 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 GTSE1Q9NYZ3 720 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 ORC3Q9UBD5 711 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 TPCN1Q9ULQ1 816 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
NPLOC4-220ENST00000576940 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 SPECC1L-ADORA2AF8WAN1 911 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 K7ERI5 159 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 SYN3O14994 580 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 CHADO15335 359 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 NEMFO60524 1076 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 REC8O95072 547 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 PAPSS2O95340 614 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 FOSBP53539 338 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 YARSP54577 528 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 EPHA5P54756 1037 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 MLLT6P55198 1093 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 LRRC32Q14392 662 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 PON2Q15165 354 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 STXBP5Q5T5C0 1151 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 TPGS2Q68CL5 300 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 CENPQQ7L2Z9 268 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 DDX12PQ92771 950 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 LRRC3Q9BY71 257 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 TM6SF1Q9BZW5 370 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 SMOC1Q9H4F8 434 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 SLITRK6Q9H5Y7 841 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 TUFT1Q9NNX1 390 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 ASAH2Q9NR71 780 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 AFF4Q9UHB7 1163 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 TNFSF13BQ9Y275 285 aa11.09□□□□□ -0.63
NPLOC4-220ENST00000576940 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 MYBPHLA2RUH7 354 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 ARHGEF35A5YM69 484 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 MEFVO15553 781 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 EXTL3O43909 919 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 PFKFB2O60825 505 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 VNN2O95498 520 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 OR4Q2P0C623 313 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 ZNF806P0C7X5 589 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 GRM5P41594 1212 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 FCHO2Q0JRZ9 810 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 ECM1Q16610 540 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 DGKKQ5KSL6 1271 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 STPG1Q5TH74 334 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 WDR5BQ86VZ2 330 aa11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 ARID3BQ8IVW6 561 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-220ENST00000576940 C12orf50Q8NA57 414 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms