RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CYP3A7-CYP3A51PA0A087WV96 503 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 KRBA1A5PL33 1030 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 LOC730098B7Z3J9 87 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 WISP1O95388 367 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 B3GALT4O96024 378 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 LAG3P18627 525 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 SP100P23497 879 aaPredicted RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 CYP3A7P24462 503 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 SFNP31947 248 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 TECP42680 631 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 RBM25P49756 843 aaKnown RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 NPEPPSP55786 919 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 UBE3AQ05086 875 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 SCRN1Q12765 414 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 COASYQ13057 564 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 MRPL58Q14197 206 aaKnown RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 NONOQ15233 471 aaKnown RBP eCLIP6.97□□□□□ -1.29
NUP88-212ENST00000576708 LETM2Q2VYF4 491 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 XKR3Q5GH77 459 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 RPS26P11Q5JNZ5 115 aaPredicted RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 SYCE2Q6PIF2 218 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 ANO5Q75V66 913 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 TMEM173Q86WV6 379 aaPredicted RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 RHPN2Q8IUC4 686 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 MAP4K3Q8IVH8 894 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 ABI1Q8IZP0 508 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 DAGLBQ8NCG7 672 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 SMRP1Q8NCR6 262 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 FEZF2Q8TBJ5 459 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 UBASH3BQ8TF42 649 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 AUTS2Q8WXX7 1259 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 PPP2R3CQ969Q6 453 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 RPGRIP1Q96KN7 1286 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 ZNF558Q96NG5 402 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 TCF25Q9BQ70 676 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 TM6SF1Q9BZW5 370 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 OSGEPQ9NPF4 335 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 ENTPD7Q9NQZ7 604 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 SUCLA2Q9P2R7 463 aaPredicted RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 WRAP73Q9P2S5 460 aaPredicted RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 DDX25Q9UHL0 483 aaKnown RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 VAV3Q9UKW4 847 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 TPCN1Q9ULQ1 816 aa6.97□□□□□ -1.29
NUP88-212ENST00000576708 MYH9P35579 1960 aaKnown RBP6.97□□□□□ -1.29
NUP88-212ENST00000576708 WDR81Q562E7 1941 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 A0A087WWV3 80 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 IGKV6-21A0A0C4DH24 114 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 A0A0U1RQF3 1178 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 B4GALT3O60512 393 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 MAFO75444 373 aaPredicted RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 CTDNEP1O95476 244 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 WEE2P0C1S8 567 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 CA8P35219 290 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 BCAR1P56945 870 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 KCNC3Q14003 757 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 HERC4Q5GLZ8 1057 aaPredicted RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 ALYREFQ86V81 257 aaKnown RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 SLC39A11Q8N1S5 342 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 LRRC43Q8N309 656 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 C12orf76Q8N812 135 aaPredicted RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 NECAB1Q8N987 351 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 RDM1Q8NG50 284 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 BCL7CQ8WUZ0 217 aaPredicted RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 EDAQ92838 391 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 TMEM143Q96AN5 459 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 NLRP4Q96MN2 994 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 PHF20Q9BVI0 1012 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 GCOM2Q9BZD3 368 aaPredicted RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 C22orf23Q9BZE7 217 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 S1PR5Q9H228 398 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 SLKQ9H2G2 1235 aaPredicted RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 SRA1Q9HD15 236 aaKnown RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 SPG21Q9NZD8 308 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 RGL1Q9NZL6 768 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 PUF60Q9UHX1 559 aaKnown RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 PIN4Q9Y237 131 aaKnown RBP6.96□□□□□ -1.3
NUP88-212ENST00000576708 INPP5FQ9Y2H2 1132 aa6.96□□□□□ -1.3
NUP88-212ENST00000576708 CCDC194A0A1B0GVG4 234 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 TMEM221A6NGB7 291 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 C2orf71A6NGG8 1288 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 M0R296 226 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 CCNT1O60563 726 aaKnown RBP6.95□□□□□ -1.3
NUP88-212ENST00000576708 PFKFB2O60825 505 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 CLASP2O75122 1294 aaKnown RBP6.95□□□□□ -1.3
NUP88-212ENST00000576708 PAGE1O75459 146 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 LARGE1O95461 756 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 ECEL1O95672 775 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 CXCL14O95715 111 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 EOMESO95936 686 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 CELA3AP09093 270 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 SRGAP2CP0DJJ0 459 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 FDPSP14324 419 aaKnown RBP6.95□□□□□ -1.3
NUP88-212ENST00000576708 AK2P54819 239 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 PSMC5P62195 406 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 CYP4A11Q02928 519 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 KRT17Q04695 432 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 CTTNQ14247 550 aaKnown RBP6.95□□□□□ -1.3
NUP88-212ENST00000576708 CBX2Q14781 532 aaPredicted RBP6.95□□□□□ -1.3
NUP88-212ENST00000576708 DUOXA2Q1HG44 320 aa6.95□□□□□ -1.3
NUP88-212ENST00000576708 TSNAXIP1Q2TAA8 658 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms