RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 TUSC3Q13454 348 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 ARHGAP44Q17R89 818 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 ZNF667Q5HYK9 610 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 IQCEQ6IPM2 695 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 RRAGAQ7L523 313 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 ENOSF1Q7L5Y1 443 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 OTOP2Q7RTS6 562 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 LRRC52Q8N7C0 313 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 LMO3Q8TAP4 145 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
ERCC4-208ENST00000576348 NUCKS1Q9H1E3 243 aaKnown RBP17.73■□□□□ 0.43
ERCC4-208ENST00000576348 MTIF3Q9H2K0 278 aaKnown RBP17.73■□□□□ 0.43
ERCC4-208ENST00000576348 SIX2Q9NPC8 291 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 NXF1Q9UBU9 619 aaKnown RBP17.73■□□□□ 0.43
ERCC4-208ENST00000576348 SIX4Q9UIU6 781 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 TBKBP1A7MCY6 615 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 EPHB6O15197 1021 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 INPPL1O15357 1258 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 MFAP3LO75121 409 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 RPL9P32969 192 aaKnown RBP17.72■□□□□ 0.43
ERCC4-208ENST00000576348 AFF1P51825 1210 aaKnown RBP17.72■□□□□ 0.43
ERCC4-208ENST00000576348 YWHAEP62258 255 aaKnown RBP17.72■□□□□ 0.43
ERCC4-208ENST00000576348 SV2CQ496J9 727 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 C9orf57Q5W0N0 161 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 SPOPLQ6IQ16 392 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 GJB7Q6PEY0 223 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 ZNF365Q70YC5 407 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 FMNL3Q8IVF7 1028 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 ARHGEF19Q8IW93 802 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 UROC1Q96N76 676 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 NIF3L1Q9GZT8 377 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 MIOSQ9NXC5 875 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 FBXL5Q9UKA1 691 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 PLAGL2Q9UPG8 496 aa17.72■□□□□ 0.43
ERCC4-208ENST00000576348 CASTOR2A6NHX0 329 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 PODXLO00592 558 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 NOL4O94818 638 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 USP8P40818 1118 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 STAT1P42224 750 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 TAF6P49848 677 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 FXR1P51114 621 aaKnown RBP eCLIP17.71■□□□□ 0.43
ERCC4-208ENST00000576348 ADKP55263 362 aaKnown RBP17.71■□□□□ 0.43
ERCC4-208ENST00000576348 WDR5P61964 334 aaKnown RBP17.71■□□□□ 0.43
ERCC4-208ENST00000576348 SOX4Q06945 474 aaPredicted RBP17.71■□□□□ 0.43
ERCC4-208ENST00000576348 WDR72Q3MJ13 1102 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 PHLDB3Q6NSJ2 640 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 FAM117BQ6P1L5 589 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 SCARA5Q6ZMJ2 495 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 GSTCDQ8NEC7 633 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 OR8K1Q8NGG5 319 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 TATDN2Q93075 761 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 ELMO3Q96BJ8 720 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 VWCEQ96DN2 955 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 TRIM44Q96DX7 344 aaPredicted RBP17.71■□□□□ 0.43
ERCC4-208ENST00000576348 MMS19Q96T76 1030 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 STK33Q9BYT3 514 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 TBC1D13Q9NVG8 400 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 PCDH10Q9P2E7 1040 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 NUB1Q9Y5A7 615 aa17.71■□□□□ 0.43
ERCC4-208ENST00000576348 LRRN2O75325 713 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 LRPAP1P30533 357 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 GATMP50440 423 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 GCNT1Q02742 428 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 GOLGA8FQ08AF8 430 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 GOLGA8DPQ0D2H9 430 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 CUL2Q13617 745 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 ASIC2Q16515 512 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 PAN2Q504Q3 1202 aaKnown RBP17.7■□□□□ 0.42
ERCC4-208ENST00000576348 SFMBT2Q5VUG0 894 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 PDXDC1Q6P996 788 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 LRRC43Q8N309 656 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 TMEM130Q8N3G9 435 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 CASD1Q96PB1 797 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 TTYH3Q9C0H2 523 aa17.7■□□□□ 0.42
ERCC4-208ENST00000576348 APOBEC3GQ9HC16 384 aaKnown RBP17.7■□□□□ 0.42
ERCC4-208ENST00000576348 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 LRRC53A6NM62 1247 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 STAU1O95793 577 aaKnown RBP17.69■□□□□ 0.42
ERCC4-208ENST00000576348 CCDC172P0C7W6 258 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 KRT5P13647 590 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 DEFB103AP81534 67 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 DRAP1Q14919 205 aaPredicted RBP17.69■□□□□ 0.42
ERCC4-208ENST00000576348 SPOUT1Q5T280 376 aaKnown RBP17.69■□□□□ 0.42
ERCC4-208ENST00000576348 TOP1MTQ969P6 601 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 PANX2Q96RD6 677 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 ZBED2Q9BTP6 218 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 XYLT2Q9H1B5 865 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 ABHD10Q9NUJ1 306 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 MYO6Q9UM54 1294 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 SLC4A7Q9Y6M7 1214 aa17.69■□□□□ 0.42
ERCC4-208ENST00000576348 F8VZ95 297 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 PIRO00625 290 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 PPEF2O14830 753 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 OR1G1P47890 313 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 CLCNKBP51801 687 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 ARID5AQ03989 594 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 TMEM240Q5SV17 173 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 DPY19L2P1Q6NXN4 242 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 DSTYKQ6XUX3 929 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms