RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	PIR	O00625	290 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	TADA2A	O75478	443 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	IL9	P15248	144 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	RPL13	P26373	211 aa	Known RBP	11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	NLRP12	P59046	1061 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	FKBP3	Q00688	224 aa	Known RBP	11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	ENPEP	Q07075	957 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	ADAM9	Q13443	819 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	STIM1	Q13586	685 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	DPCR1	Q3MIW9	517 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	CCDC183	Q5T5S1	534 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	C9orf57	Q5W0N0	161 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	KLHL10	Q6JEL2	608 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	PDE12	Q6L8Q7	609 aa	Known RBP	11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	WDR49	Q8IV35	697 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	VPS52	Q8N1B4	723 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	MLKL	Q8NB16	471 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	HASPIN	Q8TF76	798 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	NELFB	Q8WX92	580 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	ZNF516	Q92618	1163 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	EEF2KMT	Q96G04	330 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	POP1	Q99575	1024 aa	Known RBP	11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	CGRRF1	Q99675	332 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	TCF25	Q9BQ70	676 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	MKNK1	Q9BUB5	465 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	NGRN	Q9NPE2	291 aa	Known RBP	11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	DPP3	Q9NY33	737 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	STK39	Q9UEW8	545 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	SIX4	Q9UIU6	781 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	CTNND2	Q9UQB3	1225 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	IRAK3	Q9Y616	596 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	ATG2A	Q2TAZ0	1938 aa		11.72	□□□□□ -0.53
SLC12A4-215	ENST00000575857	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.71	□□□□□ -0.53	3e-9	■■■■■ 206.8
SLC12A4-215	ENST00000575857	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	C2orf71	A6NGG8	1288 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	HIDE1	A8MVS5	230 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857		H3BQ06	376 aa	Predicted RBP	11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	CETN3	O15182	167 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	SPTLC1	O15269	473 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	FGFR3	P22607	806 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	HOXD11	P31277	338 aa	Predicted RBP	11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	PSMC2	P35998	433 aa	Known RBP	11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	BRCC3	P46736	316 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	DLG4	P78352	724 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	TFAM	Q00059	246 aa	Known RBP	11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	DSG1	Q02413	1049 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	PAK1	Q13153	545 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	COL19A1	Q14993	1142 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	PTPN14	Q15678	1187 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	KLHL40	Q2TBA0	621 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	TIGD5	Q53EQ6	642 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	KIAA0319	Q5VV43	1072 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	CEP135	Q66GS9	1140 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	ADGRD2	Q7Z7M1	963 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	GPR65	Q8IYL9	337 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	MRPL43	Q8N983	215 aa	Known RBP	11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	TMC2	Q8TDI7	906 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	AUTS2	Q8WXX7	1259 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	CCDC127	Q96BQ5	260 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	SUSD3	Q96L08	255 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	TSG101	Q99816	390 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	MTMR12	Q9C0I1	747 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857	RWDD2A	Q9UIY3	292 aa		11.71	□□□□□ -0.53
SLC12A4-215	ENST00000575857		I3L4J1	428 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SLC16A3	O15427	465 aa	Known RBP	11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CSPG5	O95196	566 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ITGB3	P05106	788 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	DLAT	P10515	647 aa	Known RBP	11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	STX17	P56962	302 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	LILRA4	P59901	499 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ELAVL2	Q12926	359 aa	Known RBP	11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SMC1A	Q14683	1233 aa	Known RBP	11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	DUOXA2	Q1HG44	320 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	USP41	Q3LFD5	358 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TCEAL5	Q5H9L2	206 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	RTP2	Q5QGT7	225 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	FAM171A1	Q5VUB5	890 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PLPP4	Q5VZY2	271 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	C15orf39	Q6ZRI6	1047 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	INTS8	Q75QN2	995 aa	Known RBP	11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TRAPPC11	Q7Z392	1133 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TMC7	Q7Z402	723 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	FAM186B	Q8IYM0	893 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CACTIN	Q8WUQ7	758 aa	Known RBP	11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	B3GALT6	Q96L58	329 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CEP63	Q96MT8	703 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	NSUN3	Q9H649	340 aa	Known RBP	11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	RXFP1	Q9HBX9	757 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ENTPD7	Q9NQZ7	604 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ITGA11	Q9UKX5	1188 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	FRMD4B	Q9Y2L6	1034 aa		11.7	□□□□□ -0.54
SLC12A4-215	ENST00000575857	BICDL2	A1A5D9	508 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PI4K2B	G5E9Z4	385 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857		M0QZQ0	153 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SYN3	O14994	580 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	GPR37L1	O60883	481 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms