RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 KIF20AO95235 890 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 RPN1P04843 607 aaKnown RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 EPCAMP16422 314 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 IGFBP6P24592 240 aaPredicted RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 AARSP49588 968 aaKnown RBP eCLIP14.72□□□□□ -0.05
CIITA-210ENST00000575513 FAM160A1Q05DH4 1040 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 SPAG1Q07617 926 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 STK4Q13043 487 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 SNW1Q13573 536 aaKnown RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 KCNB1Q14721 858 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 SURF1Q15526 300 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 CLUL1Q15846 466 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 PSMD5Q16401 504 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 CES5AQ6NT32 575 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 ADHFE1Q8IWW8 467 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 APPL2Q8NEU8 664 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 CMASQ8NFW8 434 aaPredicted RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 CACTINQ8WUQ7 758 aaKnown RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 NECTIN4Q96NY8 510 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 POP1Q99575 1024 aaKnown RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 CLSTN3Q9BQT9 956 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 OXCT2Q9BYC2 517 aaPredicted RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 AGPAT3Q9NRZ7 376 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 HSPBP1Q9NZL4 362 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 MTRRQ9UBK8 725 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 USP15Q9Y4E8 981 aaPredicted RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 CITO14578 2027 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 C19orf67A6NJJ6 358 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 ZNF233A6NK53 670 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 H7C4K7 107 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 PIRO00625 290 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 NFICP08651 508 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 BRCC3P46736 316 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 RAB33AQ14088 237 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 MRPL58Q14197 206 aaKnown RBP14.71□□□□□ -0.05
CIITA-210ENST00000575513 C9orf57Q5W0N0 161 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 PRSS55Q6UWB4 352 aaPredicted RBP14.71□□□□□ -0.05
CIITA-210ENST00000575513 C15orf39Q6ZRI6 1047 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 KIAA0895Q8NCT3 520 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 SAAL1Q96ER3 474 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 PCIF1Q9H4Z3 704 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 SFXN1Q9H9B4 322 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 DPP3Q9NY33 737 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 RBAKQ9NYW8 714 aaPredicted RBP14.71□□□□□ -0.05
CIITA-210ENST00000575513 HOOK1Q9UJC3 728 aaKnown RBP14.71□□□□□ -0.05
CIITA-210ENST00000575513 PCDHB8Q9UN66 801 aa14.71□□□□□ -0.05
CIITA-210ENST00000575513 ARHGEF37A1IGU5 675 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 TNFRSF10AO00220 468 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 PDXKO00764 312 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 TGM5O43548 720 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 TBC1D4O60343 1298 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 TKTP29401 623 aaKnown RBP14.7□□□□□ -0.06
CIITA-210ENST00000575513 MCM4P33991 863 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 MTHFRP42898 656 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 LILRA4P59901 499 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 ZP2Q05996 745 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 MYBPC2Q14324 1141 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 CBX2Q14781 532 aaPredicted RBP14.7□□□□□ -0.06
CIITA-210ENST00000575513 ATAT1Q5SQI0 421 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 SLC8B1Q6J4K2 584 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 XXYLT1Q8NBI6 393 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 ZSWIM2Q8NEG5 633 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 RIPOR3Q96MK2 946 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 PHF7Q9BWX1 381 aaPredicted RBP14.7□□□□□ -0.06
CIITA-210ENST00000575513 GTPBP4Q9BZE4 634 aaKnown RBP14.7□□□□□ -0.06
CIITA-210ENST00000575513 MAFFQ9ULX9 164 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 TRIP11Q15643 1979 aa14.7□□□□□ -0.06
CIITA-210ENST00000575513 MUC3AQ02505 3323 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 GOLGA8IPA6NC78 632 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 GOLGA8JA6NMD2 632 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 I3L4J1 428 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 OAZ2O95190 189 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 RPL17P18621 184 aaKnown RBP14.69□□□□□ -0.06
CIITA-210ENST00000575513 TYMPP19971 482 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 UVSSAQ2YD98 709 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 VARS2Q5ST30 1063 aaKnown RBP14.69□□□□□ -0.06
CIITA-210ENST00000575513 GPR149Q86SP6 731 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 PALB2Q86YC2 1186 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 SLC9A9Q8IVB4 645 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 NELFCDQ8IXH7 590 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 EFCAB13Q8IY85 973 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 GJD3Q8N144 294 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 KREMEN2Q8NCW0 462 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 GSDMAQ96QA5 445 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 KCTD10Q9H3F6 313 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 MAN1C1Q9NR34 630 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 ZDHHC7Q9NXF8 308 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 BDP1A6H8Y1 2624 aa14.69□□□□□ -0.06
CIITA-210ENST00000575513 PRPF40AO75400 957 aaKnown RBP14.68□□□□□ -0.06
CIITA-210ENST00000575513 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 OR1D2P34982 312 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 PNPLA4P41247 253 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 SNRNP35Q16560 246 aaKnown RBP14.68□□□□□ -0.06
CIITA-210ENST00000575513 RARS2Q5T160 578 aaKnown RBP14.68□□□□□ -0.06
CIITA-210ENST00000575513 CBWD2Q8IUF1 395 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 GUF1Q8N442 669 aaKnown RBP14.68□□□□□ -0.06
CIITA-210ENST00000575513 ZNF461Q8TAF7 563 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 SPATA20Q8TB22 786 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 NECAB3Q96P71 396 aaPredicted RBP14.68□□□□□ -0.06
CIITA-210ENST00000575513 PDE11AQ9HCR9 933 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms