RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 MKRN4PQ13434 485 aaPredicted RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 MAMLD1Q13495 774 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 CCNG2Q16589 344 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 LONRF1Q17RB8 773 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 C2CD6Q53TS8 623 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 PLEKHA7Q6IQ23 1121 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 PHF13Q86YI8 300 aaPredicted RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 RHOT1Q8IXI2 618 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 KATNAL2Q8IYT4 538 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ASAP3Q8TDY4 903 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 IPO4Q8TEX9 1081 aaKnown RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 VCPIP1Q96JH7 1222 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 CCDC114Q96M63 670 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 TRAIPQ9BWF2 469 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 SLC40A1Q9NP59 571 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 SIP14410 1827 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 PHIPQ8WWQ0 1821 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 O00370 1275 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ATG7O95352 703 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ACSL3O95573 720 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 TTC4O95801 387 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 GAS8O95995 478 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 RALAP11233 206 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ATF2P15336 505 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 PTPRAP18433 802 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 GLRA2P23416 452 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 RPS12P25398 132 aaKnown RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ARL2P36404 184 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 SP2Q02086 613 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 STRN3Q13033 797 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 SWT1Q5T5J6 900 aaKnown RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 DAB2IPQ5VWQ8 1189 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 TMEM143Q96AN5 459 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ZBTB45Q96K62 511 aaPredicted RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 CGRRF1Q99675 332 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 C11orf70Q9BRQ4 267 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 MTFR1LQ9H019 292 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 MAF1Q9H063 256 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 PORCNQ9H237 461 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 MRPL47Q9HD33 250 aaKnown RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 RBAKQ9NYW8 714 aaPredicted RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ADAM22Q9P0K1 906 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 HACL1Q9UJ83 578 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 ANAPC5Q9UJX4 755 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 PCDHB4Q9Y5E5 795 aa9.52□□□□□ -0.89
NCBP3-204ENST00000574911 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
NCBP3-204ENST00000574911 COL11A1P12107 1806 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 CLTAP09496 248 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 GNA15P30679 374 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 NAMPTP43490 491 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 POLGP54098 1239 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 TRIP13Q15645 432 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 GNPTABQ3T906 1256 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 CCDC38Q502W7 563 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 SLFN12LQ6IEE8 588 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 JDP2Q8WYK2 163 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 SCLT1Q96NL6 688 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 HEMGNQ9BXL5 484 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 DHX33Q9H6R0 707 aaKnown RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ACAD9Q9H845 621 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 A1CFQ9NQ94 594 aaKnown RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 KLC4Q9NSK0 619 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 NINJ2Q9NZG7 142 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ADGRA2Q96PE1 1338 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 CNTNAP2Q9UHC6 1331 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 DNAJC8O75937 253 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 LDHAP00338 332 aaKnown RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 OATP04181 439 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ICAM3P32942 547 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ADCY8P40145 1251 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 C1QBPQ07021 282 aaKnown RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ZBTB41Q5SVQ8 909 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 DCAF15Q66K64 600 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 PPP1R2P3Q6NXS1 205 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 VSTM1Q6UX27 236 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ANKS1BQ7Z6G8 1248 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 RELL1Q8IUW5 271 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 PASD1Q8IV76 773 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 UBR7Q8N806 425 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 RBBP8NLQ8NC74 664 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 BBOF1Q8ND07 529 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 EXD1Q8NHP7 514 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ARHGEF2Q92974 986 aaKnown RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ZKSCAN4Q969J2 545 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-204ENST00000574911 OSBPL8Q9BZF1 889 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 CCDC113Q9H0I3 377 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 ZNF302Q9NR11 478 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 SCINQ9Y6U3 715 aa9.51□□□□□ -0.89
NCBP3-204ENST00000574911 DOCK5Q9H7D0 1870 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 A0A0B4J269 797 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 EDN1P05305 212 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 POTEJP0CG39 1038 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 TBXAS1P24557 533 aaPredicted RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 ATP5DP30049 168 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 GTF2A1P52655 376 aaPredicted RBP9.5□□□□□ -0.89
NCBP3-204ENST00000574911 ZNF132P52740 706 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 HMGCS2P54868 508 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 XRCC4Q13426 336 aa9.5□□□□□ -0.89
NCBP3-204ENST00000574911 KYNUQ16719 465 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms