RNA–Protein interactions for RNA: ENST00000574822.6

CACNA1A-204, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-204ENST00000574822 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 SOX4Q06945 474 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 ELAVL2Q12926 359 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 UPP1Q16831 310 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 SGSM1Q2NKQ1 1148 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 ZNF699Q32M78 642 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 WDR44Q5JSH3 913 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 C1orf220Q5T0J3 134 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 FAM109BQ6ICB4 259 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 KCNT2Q6UVM3 1135 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 GBP6Q6ZN66 633 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 C15orf39Q6ZRI6 1047 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 COLGALT1Q8NBJ5 622 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 TMEM169Q96HH4 297 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 RBSNQ9H1K0 784 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 CWH43Q9H720 699 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 SLC28A3Q9HAS3 691 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 DNAJB4Q9UDY4 337 aa13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.31
CACNA1A-204ENST00000574822 ANO9A1A5B4 782 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 LCHNA4D1U4 455 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 LINC01553A4QN01 128 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 TMEM189-UBE2V1I3L0A0 370 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 PIRO00625 290 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 NRP1O14786 923 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 TADA2AO75478 443 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 HLA-DRAP01903 254 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 GALTP07902 379 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 SLC11A1P49279 550 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 GUCY2FP51841 1108 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 UBASH3AP57075 661 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 TNNC1P63316 161 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 FANCCQ00597 558 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 UBXN1Q04323 297 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 KRT17Q04695 432 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 GAS2L3Q86XJ1 694 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 TAS1R2Q8TE23 839 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 PCMTD1Q96MG8 357 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 RAB20Q9NX57 234 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 SPG21Q9NZD8 308 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 ADAM28Q9UKQ2 775 aa13.09□□□□□ -0.31
CACNA1A-204ENST00000574822 KIF4AO95239 1232 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 STAU1O95793 577 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 DNAJB2P25686 324 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 BMS1Q14692 1282 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 LRIT3Q3SXY7 679 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 ZNF667Q5HYK9 610 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 DSTYKQ6XUX3 929 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 SLC39A11Q8N1S5 342 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 FAM81BQ96LP2 452 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 C11orf84Q9BUA3 381 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 HCSTQ9UBK5 93 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 PUF60Q9UHX1 559 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 SIX4Q9UIU6 781 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 COLQQ9Y215 455 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 COQ4Q9Y3A0 265 aa13.08□□□□□ -0.32
CACNA1A-204ENST00000574822 A0A1B0GTH6 734 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 KPNA7A9QM74 516 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 B4GALT3O60512 393 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 HUS1O60921 280 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 VNN1O95497 513 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 ASS1P00966 412 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 RB1P06400 928 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 ODC1P11926 461 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 MYOGP15173 224 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 BMPR1AP36894 532 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 PBX3P40426 434 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 LILRA4P59901 499 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 MYL6P60660 151 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 NOP14P78316 857 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 WDR72Q3MJ13 1102 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 EPC2Q52LR7 807 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 HASPINQ8TF76 798 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 RABGGTAQ92696 567 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 TIFAQ96CG3 184 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 NT5C1BQ96P26 610 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 PAAF1Q9BRP4 392 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 DNAI2Q9GZS0 605 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 INTS2Q9H0H0 1204 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 NKX2-4Q9H2Z4 354 aa13.07□□□□□ -0.32
CACNA1A-204ENST00000574822 VRTNQ9H8Y1 702 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms