RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 TSPYL6Q8N831 410 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 VGLL2Q8N8G2 317 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 OR7D4Q8NG98 312 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 AFG1LQ8WV93 481 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 UCMAQ8WVF2 138 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 STON2Q8WXE9 905 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 HERVK_113Q902F9 699 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 MAML1Q92585 1016 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 CENPIQ92674 756 aaPredicted RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 HTRA1Q92743 480 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 RILPL2Q969X0 211 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 HVCN1Q96D96 273 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 EID2BQ96D98 161 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 MISP3Q96FF7 219 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 TSPAN17Q96FV3 270 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 CCDC120Q96HB5 630 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 SNX27Q96L92 541 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 WDR92Q96MX6 357 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 PRPF18Q99633 342 aaKnown RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 NUDT16L1Q9BRJ7 211 aaKnown RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 SDF4Q9BRK5 362 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 CHCHD6Q9BRQ6 235 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 CENPOQ9BU64 300 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 KATNAL1Q9BW62 490 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 HAPLN2Q9GZV7 340 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 RSPH9Q9H1X1 276 aaPredicted RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 CHST8Q9H2A9 424 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 DHX36Q9H2U1 1008 aaKnown RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 LDAHQ9H6V9 325 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 BRD9Q9H8M2 597 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 MLXIPQ9HAP2 919 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 PREBQ9HCU5 417 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 SEPSECSQ9HD40 501 aaKnown RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 SLAMF7Q9NQ25 335 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 A1CFQ9NQ94 594 aaKnown RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 LANCL2Q9NS86 450 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 KCND1Q9NSA2 647 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 TMEM140Q9NV12 185 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 POLR3BQ9NW08 1133 aaPredicted RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 SIDT1Q9NXL6 827 aaKnown RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 RGL1Q9NZL6 768 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 PIM2Q9P1W9 311 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 ARHGAP20Q9P2F6 1191 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 RBPJLQ9UBG7 517 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 AASSQ9UDR5 926 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 SRP68Q9UHB9 627 aaKnown RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 HERC5Q9UII4 1024 aaKnown RBP2.41□□□□□ -2.02
CHD3-217ENST00000574022 GPR160Q9UJ42 338 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 ZDHHC8Q9ULC8 765 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 JAG2Q9Y219 1238 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 MED16Q9Y2X0 877 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 PAXBP1Q9Y5B6 917 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 KAT6BQ8WYB5 2073 aa2.41□□□□□ -2.02
CHD3-217ENST00000574022 A0A087X0M5 115 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 CCDC196A0A1B0GTZ2 297 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 A0A1B0GX30 115 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 A0A1W2PPH5 198 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 A0A1W2PRQ8 180 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 FSD2A1L4K1 749 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 F5H0A9 414 aaPredicted RBP2.4□□□□□ -2.03
CHD3-217ENST00000574022 H0Y858 1186 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 MYO1CO00159 1063 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 FCHO1O14526 889 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 N4BP3O15049 544 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 ASNA1O43681 348 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 ZBED4O75132 1171 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 GPR32O75388 356 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 MAFO75444 373 aaPredicted RBP2.4□□□□□ -2.03
CHD3-217ENST00000574022 RASSF9O75901 435 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 WFS1O76024 890 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 ABHD16AO95870 558 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 EFEMP2O95967 443 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 GASTP01350 101 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 MPOP05164 745 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 CD1AP06126 327 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 GAAP10253 952 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 TXNP10599 105 aaKnown RBP2.4□□□□□ -2.03
CHD3-217ENST00000574022 VDRP11473 427 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 HNRNPLP14866 589 aaKnown RBP eCLIP2.4□□□□□ -2.03
CHD3-217ENST00000574022 KLRC1P26715 233 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 IL1R2P27930 398 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 CST5P28325 142 aaPredicted RBP2.4□□□□□ -2.03
CHD3-217ENST00000574022 POLD1P28340 1107 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 GABRB3P28472 473 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 CRHR1P34998 444 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 PTPN7P35236 360 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 CD96P40200 585 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 AARSP49588 968 aaKnown RBP eCLIP2.4□□□□□ -2.03
CHD3-217ENST00000574022 COPAP53621 1224 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 ATXN1P54253 815 aaKnown RBP2.4□□□□□ -2.03
CHD3-217ENST00000574022 MXRA7P84157 204 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 ATP8B2P98198 1209 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 UBE3AQ05086 875 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 FSTL1Q12841 308 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 ADAM9Q13443 819 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 MTM1Q13496 603 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 CUL4BQ13620 913 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 SLC12A1Q13621 1099 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 NR1I3Q14994 352 aa2.4□□□□□ -2.03
CHD3-217ENST00000574022 PLCL1Q15111 1095 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms