RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 DCAF17Q5H9S7 520 aaPredicted RBP13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 EFCAB13Q8IY85 973 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 SPPL3Q8TCT6 385 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 GDPD5Q8WTR4 605 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 POF1BQ8WVV4 589 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 MMRN2Q9H8L6 949 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 GOLGA2P5Q9HBQ8 144 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 ALG13Q9NP73 1137 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 INTS13Q9NVM9 706 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 DPP3Q9NY33 737 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 ADAM28Q9UKQ2 775 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 LZTS1Q9Y250 596 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 NUB1Q9Y5A7 615 aa13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPLOC4-214ENST00000573876 TMEM189-UBE2V1I3L0A0 370 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 RFXAPO00287 272 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 GRM6O15303 877 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 LPXNO60711 386 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 ATP1A3P13637 1013 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 PRKCSHP14314 528 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 ZNF18P17022 549 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 PAX3P23760 479 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 EEF1GP26641 437 aaKnown RBP13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 GCLMP48507 274 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 GUCY2FP51841 1108 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 MCCD1P59942 119 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 CLDN10P78369 228 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 ENPEPQ07075 957 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 UPP1Q16831 310 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 C1orf220Q5T0J3 134 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 Q7L0L9 218 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 TRIM59Q8IWR1 403 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 ANKRD20A12PQ8NF67 263 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 OR5B17Q8NGF7 314 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 RABGGTAQ92696 567 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 FAM84AQ96KN4 292 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 PAAF1Q9BRP4 392 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 TUBGCP2Q9BSJ2 902 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 VPS16Q9H269 839 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 CACNG4Q9UBN1 327 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 ITGA11Q9UKX5 1188 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 KIAA1671Q9BY89 1806 aa13.92□□□□□ -0.18
NPLOC4-214ENST00000573876 SF3B1O75533 1304 aaKnown RBP eCLIP13.91□□□□□ -0.182e-7■■■■□ 26.7
NPLOC4-214ENST00000573876 PTPRJQ12913 1337 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 PRRC2BQ5JSZ5 2229 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 ANK1P16157 1881 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 PDCD11Q14690 1871 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 EPOPA6NHQ4 379 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 PES1O00541 588 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 STX10O60499 249 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 PHACTR2O75167 634 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 KIF4AO95239 1232 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 KRT19P08727 400 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 RBP5P82980 135 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 PPP3CAQ08209 521 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 KCNH2Q12809 1159 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 KRT31Q15323 416 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 C9orf57Q5W0N0 161 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 PDE12Q6L8Q7 609 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 FUT10Q6P4F1 479 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 TMC7Q7Z402 723 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 DDX53Q86TM3 631 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 TMEM173Q86WV6 379 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 TMEM130Q8N3G9 435 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 MICAL1Q8TDZ2 1067 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 HASPINQ8TF76 798 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 SLC35C1Q96A29 364 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 ZNF560Q96MR9 790 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 ENTPD7Q9NQZ7 604 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 TLR9Q9NR96 1032 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 MARCH5Q9NX47 278 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 TAB2Q9NYJ8 693 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 LMCD1Q9NZU5 365 aa13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 LIMA1Q9UHB6 759 aaKnown RBP13.91□□□□□ -0.18
NPLOC4-214ENST00000573876 ARHGEF37A1IGU5 675 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 LRRC10BA6NIK2 292 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 SERPINC1P01008 464 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 AFPP02771 609 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 C4BPAP04003 597 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 SOD2P04179 222 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 ITGB3P05106 788 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 TPM2P07951 284 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 IGFBP4P22692 258 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 CA8P35219 290 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 PNPLA4P41247 253 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 BIRC3Q13489 604 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 TRPC3Q13507 836 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 MAN2A1Q16706 1144 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 USP41Q3LFD5 358 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 VWA3BQ502W6 1294 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 SCARA3Q6AZY7 606 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 KIAA1841Q6NSI8 718 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 SV2AQ7L0J3 742 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 TRAPPC11Q7Z392 1133 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 VPS52Q8N1B4 723 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 C1orf127Q8N9H9 656 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms