RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	HOXA9	P31269	272 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	ELF1	P32519	619 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	DNM1	Q05193	864 aa	Known RBP	12.97	□□□□□ -0.33
ABR-222	ENST00000573667	SIGLEC14	Q08ET2	396 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	TMEM132D	Q14C87	1099 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	ZBTB6	Q15916	424 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	UVSSA	Q2YD98	709 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	CTXN3	Q4LDR2	81 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	ZBTB41	Q5SVQ8	909 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.97	□□□□□ -0.33
ABR-222	ENST00000573667	JADE1	Q6IE81	842 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	ZNF280D	Q6N043	979 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	DSTYK	Q6XUX3	929 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	SLC7A14	Q8TBB6	771 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	FEZF2	Q8TBJ5	459 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	MFSD14A	Q96MC6	490 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	ASB7	Q9H672	318 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	KBTBD4	Q9NVX7	518 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	LIMD1	Q9UGP4	676 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	PCDHA7	Q9UN72	937 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	POLI	Q9UNA4	740 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	DERA	Q9Y315	318 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	STYXL1	Q9Y6J8	313 aa		12.97	□□□□□ -0.33
ABR-222	ENST00000573667	TECTA	O75443	2155 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	TMEM221	A6NGB7	291 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	TISP43	B9A030	160 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667		M0R296	226 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	POLR2D	O15514	142 aa	Known RBP	12.96	□□□□□ -0.33
ABR-222	ENST00000573667	ADRB2	P07550	413 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	ARPP19	P56211	112 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	ASIC1	P78348	528 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	KRT85	P78386	507 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	POU5F1	Q01860	360 aa	Known RBP	12.96	□□□□□ -0.33
ABR-222	ENST00000573667	YWHAH	Q04917	246 aa	Predicted RBP	12.96	□□□□□ -0.33
ABR-222	ENST00000573667	E2F4	Q16254	413 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	SPATA1	Q5VX52	437 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	SLC8B1	Q6J4K2	584 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	RTL10	Q7L3V2	364 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	GET4	Q7L5D6	327 aa	Predicted RBP	12.96	□□□□□ -0.33
ABR-222	ENST00000573667	USP37	Q86T82	979 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	UBALD2	Q8IYN6	164 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	CEP57L1	Q8IYX8	460 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	ZNF461	Q8TAF7	563 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	PBXIP1	Q96AQ6	731 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	ZNF707	Q96C28	371 aa	Predicted RBP	12.96	□□□□□ -0.33
ABR-222	ENST00000573667	STRA6	Q9BX79	667 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	TRIM9	Q9C026	710 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	PCDHB8	Q9UN66	801 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	ATP6V1D	Q9Y5K8	247 aa		12.96	□□□□□ -0.33
ABR-222	ENST00000573667	NOTCH4	Q99466	2003 aa		12.96	□□□□□ -0.34
ABR-222	ENST00000573667	ARHGEF37	A1IGU5	675 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	PRRG1	O14668	218 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	CCL16	O15467	120 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	PRPF6	O94906	941 aa	Known RBP	12.95	□□□□□ -0.34
ABR-222	ENST00000573667	IL18RAP	O95256	599 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	PAPLN	O95428	1278 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	LRG1	P02750	347 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	ASGR2	P07307	311 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	NFIC	P08651	508 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	CPB1	P15086	417 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	GART	P22102	1010 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	PAX3	P23760	479 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	CASP5	P51878	434 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	ROR1	Q01973	937 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	KCNA1	Q09470	495 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	BECN1	Q14457	450 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	ARMCX5	Q6P1M9	558 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.95	□□□□□ -0.34
ABR-222	ENST00000573667	HFE2	Q6ZVN8	426 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	GRASP	Q7Z6J2	395 aa	Predicted RBP	12.95	□□□□□ -0.34
ABR-222	ENST00000573667	SUGP1	Q8IWZ8	645 aa	Known RBP	12.95	□□□□□ -0.34
ABR-222	ENST00000573667	NOC3L	Q8WTT2	800 aa	Known RBP	12.95	□□□□□ -0.34
ABR-222	ENST00000573667	FAM213A	Q9BRX8	229 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.95	□□□□□ -0.34
ABR-222	ENST00000573667	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.95	□□□□□ -0.34	6e-6	■■■■□ 20.9
ABR-222	ENST00000573667	IGSF9	Q9P2J2	1179 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	FBXL5	Q9UKA1	691 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	RCOR1	Q9UKL0	485 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	C2CD2	Q9Y426	696 aa		12.95	□□□□□ -0.34
ABR-222	ENST00000573667	WDR27	A2RRH5	827 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667		M0QZQ0	153 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	ODC1	P11926	461 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	ATF2	P15336	505 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	FSHR	P23945	695 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	ADSS	P30520	456 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	GUCY2F	P51841	1108 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	MRPL58	Q14197	206 aa	Known RBP	12.94	□□□□□ -0.34
ABR-222	ENST00000573667	C9orf57	Q5W0N0	161 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	RESP18	Q5W5W9	173 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	BMP8A	Q7Z5Y6	402 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	NT5DC4	Q86YG4	428 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	SAAL1	Q96ER3	474 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	SPATA32	Q96LK8	384 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	C7orf25	Q9BPX7	421 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	IKZF4	Q9H2S9	585 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	CYP4F11	Q9HBI6	524 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	RAPGEFL1	Q9UHV5	662 aa		12.94	□□□□□ -0.34
ABR-222	ENST00000573667	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.93	□□□□□ -0.34
ABR-222	ENST00000573667	KIAA0391	O15091	583 aa	Known RBP	12.93	□□□□□ -0.34
ABR-222	ENST00000573667	EIF3D	O15371	548 aa	Known RBP eCLIP	12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms