RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 HVCN1Q96D96 273 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 DNAJC19Q96DA6 116 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 ST6GALNAC4Q9H4F1 302 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 CYP4F11Q9HBI6 524 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 PANK4Q9NVE7 773 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 IGSF9Q9P2J2 1179 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 EPS15L1Q9UBC2 864 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 FBXL5Q9UKA1 691 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 FBXL21Q9UKT6 434 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 PCDHB8Q9UN66 801 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 EXOC7Q9UPT5 735 aa13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 TIMM13Q9Y5L4 95 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 MORC2Q9Y6X9 1032 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-213ENST00000573519 NARSO43776 548 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 PAPLNO95428 1278 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 YEATS4O95619 227 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 LRG1P02750 347 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 NFICP08651 508 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 LAMP2P13473 410 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 CPB1P15086 417 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 LRPAP1P30533 357 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 VCPP55072 806 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 YWHAHQ04917 246 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 KCNA1Q09470 495 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 TMEM132DQ14C87 1099 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 ZBTB6Q15916 424 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 IER5LQ5T953 404 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 SLC8B1Q6J4K2 584 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 USP37Q86T82 979 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 CD302Q8IX05 232 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 SYCP3Q8IZU3 236 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 NOC3LQ8WTT2 800 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 DHX58Q96C10 678 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 ACCSQ96QU6 501 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 KCNH6Q9H252 994 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 HCFC1R1Q9NWW0 138 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 DUSP12Q9UNI6 340 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 TRIP11Q15643 1979 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 CITO14578 2027 aa13.79□□□□□ -0.2
NPLOC4-213ENST00000573519 PPEF2O14830 753 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 CUTAO60888 179 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 CFHP08603 1231 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 DNM1Q05193 864 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 MRPL58Q14197 206 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 PABPC1LQ4VXU2 614 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 L1TD1Q5T7N2 865 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 CCDC65Q8IXS2 484 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 FLCNQ8NFG4 579 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 TSPAN18Q96SJ8 248 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 PCDHB13Q9Y5F0 798 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 MTCL1Q9Y4B5 1905 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-213ENST00000573519 M0QZQ0 153 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 TBC1D4O60343 1298 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 TECTAO75443 2155 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 PPP1R37O75864 691 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ABLIM3O94929 683 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ADRB2P07550 413 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ATF2P15336 505 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 AVPR2P30518 371 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ME1P48163 572 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 CASP5P51878 434 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ADCY1Q08828 1119 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 PDCD11Q14690 1871 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 POSTNQ15063 836 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 RTL10Q7L3V2 364 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 SLC44A3Q8N4M1 653 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ITFG1Q8TB96 612 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ING5Q8WYH8 240 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 FGF13Q92913 245 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 SAAL1Q96ER3 474 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 FAM213AQ9BRX8 229 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 STRA6Q9BX79 667 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 TNMDQ9H2S6 317 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ASB7Q9H672 318 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 OLFML3Q9NRN5 406 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 DNMT3BQ9UBC3 853 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 CDH7Q9ULB5 785 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 DERAQ9Y315 318 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ZDHHC9Q9Y397 364 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 STYXL1Q9Y6J8 313 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 ZFP37Q9Y6Q3 630 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
NPLOC4-213ENST00000573519 TRIOO75962 3097 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 STK25O00506 426 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 SEC24AO95486 1093 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 POU2F2P09086 479 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 OR4Q2P0C623 313 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 ODC1P11926 461 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 RFX1P22670 979 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 ADSSP30520 456 aa13.76□□□□□ -0.21
NPLOC4-213ENST00000573519 AMPD3Q01432 767 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms