RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 KLHL10Q6JEL2 608 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
LITAF-212ENST00000573332 USP37Q86T82 979 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 FAM186BQ8IYM0 893 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 TMEM130Q8N3G9 435 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 OR5B17Q8NGF7 314 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 CCDC127Q96BQ5 260 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 BORCS6Q96GS4 357 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 SUSD3Q96L08 255 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 CEP63Q96MT8 703 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 DUSP9Q99956 384 aaKnown RBP18.65■□□□□ 0.58
LITAF-212ENST00000573332 MTMR12Q9C0I1 747 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 MRPL17Q9NRX2 175 aaKnown RBP18.65■□□□□ 0.58
LITAF-212ENST00000573332 TMEM63CQ9P1W3 806 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 PTPRJQ12913 1337 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 TRANK1O15050 2925 aa18.65■□□□□ 0.58
LITAF-212ENST00000573332 PDCD11Q14690 1871 aaKnown RBP18.65■□□□□ 0.58
LITAF-212ENST00000573332 TRIP11Q15643 1979 aa18.64■□□□□ 0.58
LITAF-212ENST00000573332 LRRIQ3A6PVS8 624 aaPredicted RBP18.64■□□□□ 0.57
LITAF-212ENST00000573332 HIDE1A8MVS5 230 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 M0QZQ0 153 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 PPEF2O14830 753 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 SYN3O14994 580 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 NCK2O43639 380 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 TNNC2P02585 160 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 DLATP10515 647 aaKnown RBP18.64■□□□□ 0.57
LITAF-212ENST00000573332 TNNI1P19237 187 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 PNPLA4P41247 253 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 LILRA4P59901 499 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 COL19A1Q14993 1142 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 FAM171A1Q5VUB5 890 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 PLPP4Q5VZY2 271 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 PDXDC1Q6P996 788 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 FILIP1Q7Z7B0 1213 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 LRRC52Q8N7C0 313 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 MAFAQ8NHW3 353 aaPredicted RBP18.64■□□□□ 0.57
LITAF-212ENST00000573332 PIK3R5Q8WYR1 880 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 ZNF516Q92618 1163 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 POP1Q99575 1024 aaKnown RBP18.64■□□□□ 0.57
LITAF-212ENST00000573332 CDCA3Q99618 268 aaPredicted RBP18.64■□□□□ 0.57
LITAF-212ENST00000573332 TTPALQ9BTX7 342 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 RXFP1Q9HBX9 757 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 RWDD2AQ9UIY3 292 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 PCDHGC5Q9Y5F6 944 aa18.64■□□□□ 0.57
LITAF-212ENST00000573332 FSD2A1L4K1 749 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 ITGB3P05106 788 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 EPB41P11171 864 aaKnown RBP18.63■□□□□ 0.57
LITAF-212ENST00000573332 VAMP7P51809 220 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 RBP5P82980 135 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 HYAL1Q12794 435 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 BFSP1Q12934 665 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 DUSP6Q16828 381 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 RTP2Q5QGT7 225 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 LMBRD2Q68DH5 695 aaPredicted RBP18.63■□□□□ 0.57
LITAF-212ENST00000573332 KIAA1841Q6NSI8 718 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 TRAPPC11Q7Z392 1133 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 ADGRD2Q7Z7M1 963 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 CSGALNACT2Q8N6G5 542 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 SYAP1Q96A49 352 aaPredicted RBP18.63■□□□□ 0.57
LITAF-212ENST00000573332 TLE6Q9H808 572 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.63■□□□□ 0.57
LITAF-212ENST00000573332 FNIP2Q9P278 1114 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 DACH1Q9UI36 760 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 SIX4Q9UIU6 781 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 CTNND2Q9UQB3 1225 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 MYO9BQ13459 2157 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 ANK1P16157 1881 aa18.63■□□□□ 0.57
LITAF-212ENST00000573332 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.62■□□□□ 0.57
LITAF-212ENST00000573332 SPTLC1O15269 473 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 C1RP00736 705 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 C4BPAP04003 597 aaKnown RBP18.62■□□□□ 0.57
LITAF-212ENST00000573332 KRT13P13646 458 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 ERCC5P28715 1186 aaPredicted RBP18.62■□□□□ 0.57
LITAF-212ENST00000573332 POLR2BP30876 1174 aaKnown RBP18.62■□□□□ 0.57
LITAF-212ENST00000573332 TAF6P49848 677 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 DLG4P78352 724 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 CREMQ03060 361 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 DPCR1Q3MIW9 517 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 MICALL1Q8N3F8 863 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 LNX1Q8TBB1 728 aaPredicted RBP18.62■□□□□ 0.57
LITAF-212ENST00000573332 AUTS2Q8WXX7 1259 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 ZNF560Q96MR9 790 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 MED15Q96RN5 788 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 PCDHB8Q9UN66 801 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 AGAP1Q9UPQ3 857 aa18.62■□□□□ 0.57
LITAF-212ENST00000573332 ARHGEF37A1IGU5 675 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 I3L4J1 428 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 CSPG5O95196 566 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 CNPP09543 421 aaKnown RBP18.61■□□□□ 0.57
LITAF-212ENST00000573332 TKTP29401 623 aaKnown RBP18.61■□□□□ 0.57
LITAF-212ENST00000573332 STX17P56962 302 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 MRPL58Q14197 206 aaKnown RBP18.61■□□□□ 0.57
LITAF-212ENST00000573332 CCDC85BQ15834 202 aaPredicted RBP18.61■□□□□ 0.57
LITAF-212ENST00000573332 CTC1Q2NKJ3 1217 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 SKOR2Q2VWA4 1001 aaPredicted RBP18.61■□□□□ 0.57
LITAF-212ENST00000573332 SV2CQ496J9 727 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 C15orf39Q6ZRI6 1047 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 ANKS3Q6ZW76 656 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 APPL2Q8NEU8 664 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms