RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 NIPAL1Q6NVV3 410 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 LLGL2Q6P1M3 1020 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 PIK3AP1Q6ZUJ8 805 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 SRBD1Q8N5C6 995 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 LILRB4Q8NHJ6 448 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 HCAR2Q8TDS4 363 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 PLVAPQ9BX97 442 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 BLZF1Q9H2G9 400 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 THAP9Q9H5L6 903 aa11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 MTRF1LQ9UGC7 380 aaKnown RBP11.11□□□□□ -0.63
CHRNB1-205ENST00000573209 CCDC194A0A1B0GVG4 234 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 hCG_1642624A0A1W2PR95 340 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 SNTNA6NMZ2 147 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 CENPBD1B2RD01 187 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 BAIAP3O94812 1187 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 KRT6AP02538 564 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 KRT6BP04259 564 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 TCP1P17987 556 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 M6PRP20645 277 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 CD9P21926 228 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 CTNNA1P35221 906 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 PAFAH1B1P43034 410 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 RASSF7Q02833 373 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 UBXN1Q04323 297 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 CAVIN4Q5BKX8 364 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 TJAP1Q5JTD0 557 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 ACAD11Q709F0 780 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 CAND1Q86VP6 1230 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 NELFCDQ8IXH7 590 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 SLC38A6Q8IZM9 456 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 LZTR1Q8N653 840 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 EXD1Q8NHP7 514 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 FRS2Q8WU20 508 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 ZFPM2Q8WW38 1151 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 RPGRQ92834 1020 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 PGBD4Q96DM1 585 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 CIB1Q99828 191 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 HINFPQ9BQA5 517 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 MAGEF1Q9HAY2 307 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 PALMDQ9NP74 551 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 DDX18Q9NVP1 670 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 ARMC1Q9NVT9 282 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 TRIM33Q9UPN9 1127 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 DMTF1Q9Y222 760 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 CDK5RAP2Q96SN8 1893 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 VILLO15195 856 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 ICMTO60725 284 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 DKC1O60832 514 aaKnown RBP eCLIP11.1□□□□□ -0.637e-14■■■□□ 18.8
CHRNB1-205ENST00000573209 SHBGP04278 402 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 OCM2P0CE71 109 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 OCMP0CE72 109 aaPredicted RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 MCM7P33993 719 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 HSD17B3P37058 310 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 RASSF2P50749 326 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 IL17AQ16552 155 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 BTBD8Q5XKL5 378 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 DENND2CQ68D51 928 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 TMC7Q7Z402 723 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 SATL1Q86VE3 508 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 ADSSL1Q8N142 457 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 MB21D1Q8N884 522 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 BBOF1Q8ND07 529 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 PRPF31Q8WWY3 499 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 VTI1AQ96AJ9 217 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 TLCD1Q96CP7 247 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 SERHL2Q9H4I8 314 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 ARPP21Q9UBL0 812 aaPredicted RBP11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 CAPN11Q9UMQ6 739 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 ERVK-11Q9UQG0 969 aa11.1□□□□□ -0.63
CHRNB1-205ENST00000573209 COL24A1Q17RW2 1714 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 LAD1O00515 517 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 OPHN1O60890 802 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 HEXIM1O94992 359 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 CHN1P15882 459 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 GRM2Q14416 872 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 KCTD21Q4G0X4 260 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 SBK1Q52WX2 424 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 SGO2Q562F6 1265 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 DHRS4L2Q6PKH6 230 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 C4orf22Q6V702 233 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 BLIDQ8IZY5 108 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 ELMOD1Q8N336 334 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 C4orf32Q8N8J7 132 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 PDZD8Q8NEN9 1154 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 ANGPTL6Q8NI99 470 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 STAMQ92783 540 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 DHRS9Q9BPW9 319 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 MRPL9Q9BYD2 267 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 TBC1D23Q9NUY8 699 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 MKL2Q9ULH7 1088 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 DOLKQ9UPQ8 538 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 SBF2Q86WG5 1849 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 NRAPQ86VF7 1730 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 M0QX08 132 aa11.09□□□□□ -0.63
CHRNB1-205ENST00000573209 ENPP3O14638 875 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms