RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 FAM86C2PA6NEL3 165 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 GADD45BO75293 160 aaPredicted RBP9.88□□□□□ -0.83
NDE1-207ENST00000573203 SPATA31D3P0C874 917 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 GAP43P17677 238 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 COL9A1P20849 921 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 RPL9P32969 192 aaKnown RBP9.88□□□□□ -0.83
NDE1-207ENST00000573203 TNFSF9P41273 254 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 BRCC3P46736 316 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 ME1P48163 572 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 PPP2R3AQ06190 1150 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 HERC4Q5GLZ8 1057 aaPredicted RBP9.88□□□□□ -0.83
NDE1-207ENST00000573203 TMEM31Q5JXX7 168 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 CCDC183Q5T5S1 534 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 LRSAM1Q6UWE0 723 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 SPATA31D4Q6ZUB0 917 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 ZNF720Q7Z2F6 126 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 GPR149Q86SP6 731 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 LNX1Q8TBB1 728 aaPredicted RBP9.88□□□□□ -0.83
NDE1-207ENST00000573203 DHX58Q96C10 678 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 HVCN1Q96D96 273 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 CHAMP1Q96JM3 812 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 LRRC27Q9C0I9 530 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 PLEKHA4Q9H4M7 779 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 RPF1Q9H9Y2 349 aaKnown RBP9.88□□□□□ -0.83
NDE1-207ENST00000573203 PLEKHA5Q9HAU0 1116 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 TBC1D7Q9P0N9 293 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 TMEM63CQ9P1W3 806 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 MUTYHQ9UIF7 546 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 RABGEF1Q9UJ41 708 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 NUB1Q9Y5A7 615 aa9.88□□□□□ -0.83
NDE1-207ENST00000573203 DENND4AQ7Z401 1863 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 CCDC195A0A1B0GUA6 201 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 TTC26A0AVF1 554 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 LACTBL1A8MY62 500 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 ANKRD63C9JTQ0 380 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 I3L4J1 428 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 MEFVO15553 781 aaPredicted RBP9.87□□□□□ -0.83
NDE1-207ENST00000573203 MAP3K7O43318 606 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 TGM5O43548 720 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 XPOTO43592 962 aaKnown RBP9.87□□□□□ -0.83
NDE1-207ENST00000573203 GPR37L1O60883 481 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 GCNT3O95395 438 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 C1RP00736 705 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 FGFR3P22607 806 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 IGFBP6P24592 240 aaPredicted RBP9.87□□□□□ -0.83
NDE1-207ENST00000573203 TKTP29401 623 aaKnown RBP9.87□□□□□ -0.83
NDE1-207ENST00000573203 AMPD3Q01432 767 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 SPAG1Q07617 926 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 ZBTB41Q5SVQ8 909 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 ADALQ6DHV7 355 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 SLFN12LQ6IEE8 588 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 SLC39A4Q6P5W5 647 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 CD300LGQ6UXG3 332 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 C15orf39Q6ZRI6 1047 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 CCDC65Q8IXS2 484 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 IQUBQ8NA54 791 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 KREMEN2Q8NCW0 462 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 C3orf58Q8NDZ4 430 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 CMASQ8NFW8 434 aaPredicted RBP9.87□□□□□ -0.83
NDE1-207ENST00000573203 HDAC7Q8WUI4 952 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 STAMQ92783 540 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 ACCSQ96QU6 501 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 CLSTN3Q9BQT9 956 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 TNMDQ9H2S6 317 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 CUEDC2Q9H467 287 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 GDPD2Q9HCC8 539 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 PANK4Q9NVE7 773 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 TUBGCP4Q9UGJ1 667 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 EXOC7Q9UPT5 735 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 TRIOO75962 3097 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 ANK1P16157 1881 aa9.87□□□□□ -0.83
NDE1-207ENST00000573203 A0A1W2PQ27 194 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 A0A1W2PQ64 194 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 A0A1W2PQD8 194 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 GOLGA6L4A6NEF3 574 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 C2CD4DB7Z1M9 353 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 FAM189A1O60320 539 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 RFPL2O75678 378 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 OR1D2P34982 312 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 ASIC1P78348 528 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 ALCAMQ13740 583 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 POSTNQ15063 836 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 ENOX2Q16206 610 aaKnown RBP9.86□□□□□ -0.83
NDE1-207ENST00000573203 AXDND1Q5T1B0 1012 aaPredicted RBP9.86□□□□□ -0.83
NDE1-207ENST00000573203 LIN9Q5TKA1 542 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 LILRA6Q6PI73 481 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 SHC4Q6S5L8 630 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 CYP26C1Q6V0L0 522 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 CCDC149Q6ZUS6 474 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 ANKS3Q6ZW76 656 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 GAS2L3Q86XJ1 694 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 CD302Q8IX05 232 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 SYCP3Q8IZU3 236 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 TDRD5Q8NAT2 981 aaKnown RBP9.86□□□□□ -0.83
NDE1-207ENST00000573203 FEZF2Q8TBJ5 459 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 POMGNT1Q8WZA1 660 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 SMG7Q92540 1137 aaKnown RBP9.86□□□□□ -0.83
NDE1-207ENST00000573203 ACSF2Q96CM8 615 aaPredicted RBP9.86□□□□□ -0.83
NDE1-207ENST00000573203 TSPAN18Q96SJ8 248 aa9.86□□□□□ -0.83
NDE1-207ENST00000573203 LRFN3Q9BTN0 628 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms