RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 DCAF17Q5H9S7 520 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TOR1AIP1Q5JTV8 583 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 SLC22A25Q6T423 547 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 KLHL17Q6TDP4 642 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 ANGPTL8Q6UXH0 198 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 LPCAT2Q7L5N7 544 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TTC39CQ8N584 583 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 USHBP1Q8N6Y0 703 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 RNF217Q8TC41 542 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 NEIL1Q96FI4 390 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 ZNF764Q96H86 408 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 AK8Q96MA6 479 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 DACH2Q96NX9 599 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 GBP5Q96PP8 586 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TWNKQ96RR1 684 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 SPXQ9BT56 116 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 CRISPLD1Q9H336 500 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 THAP9Q9H5L6 903 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TASP1Q9H6P5 420 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 ZNF395Q9H8N7 513 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 ARMT1Q9H993 441 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TCF7L2Q9NQB0 619 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 NECTIN3Q9NQS3 549 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 GJB4Q9NTQ9 266 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 CATSPERZQ9NTU4 200 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 GPATCH2Q9NW75 528 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 CHCHD3Q9NX63 227 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TBC1D14Q9P2M4 693 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 SUCLA2Q9P2R7 463 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 PI4KBQ9UBF8 816 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 CACNG4Q9UBN1 327 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 RNF112Q9ULX5 631 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 LIMCH1Q9UPQ0 1083 aa5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 SMG5Q9UPR3 1016 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-210ENST00000572787 TMEM94Q12767 1356 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 A0A0U1RQK1 487 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 A0A1B0GTH6 734 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 ARHGAP10A1A4S6 786 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 ZNF320A2RRD8 509 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 A8MXE2 369 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 FAM47E-STBD1D6RA91 191 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 PTGES3LE9PB15 166 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 TERTO14746 1132 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 SHOXO15266 292 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 MEFVO15553 781 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 STX6O43752 255 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 EXOC3O60645 756 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 GJB3O75712 270 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CSPG5O95196 566 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 KIF20AO95235 890 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 PNPP00491 289 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 RPLP2P05387 115 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 ITIH2P19823 946 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 MSX1P28360 303 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 RFC1P35251 1148 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 WASP42768 502 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 SEC24CP53992 1094 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 ZNF445P59923 1031 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 DLG4P78352 724 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CYP4F3Q08477 520 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 FSTL1Q12841 308 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CUL4BQ13620 913 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 RAB30Q15771 203 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 KBTBD12Q3ZCT8 623 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CAVIN4Q5BKX8 364 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CT83Q5H943 113 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 KRBOX4Q5JUW0 171 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CCDC183Q5T5S1 534 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 PET117Q6UWS5 81 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CATSPERGQ6ZRH7 1159 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 DHX32Q7L7V1 743 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 PXKQ7Z7A4 578 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 VSIG10LQ86VR7 867 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 METTL23Q86XA0 190 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CCDC117Q8IWD4 279 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 MRPL41Q8IXM3 137 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 DIS3L2Q8IYB7 885 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 PLD6Q8N2A8 252 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 DPP10Q8N608 796 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 AOPEPQ8N6M6 819 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 FAM216AQ8WUB2 273 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 TEKT1Q969V4 418 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 EAF2Q96CJ1 260 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 ZC3H12CQ9C0D7 883 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 MMADHCQ9H3L0 296 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 RNPEPQ9H4A4 650 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 INCENPQ9NQS7 918 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 ACSS2Q9NR19 701 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 TAS2R3Q9NYW6 316 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 ACTR3BQ9P1U1 418 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CALCOCO1Q9P1Z2 691 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 TJP2Q9UDY2 1190 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 EDARQ9UNE0 448 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 GPR55Q9Y2T6 319 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 MRPL11Q9Y3B7 192 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 CCL27Q9Y4X3 112 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 LYVE1Q9Y5Y7 322 aa5.44□□□□□ -1.54
TOPBP1-210ENST00000572787 GPR75-ASB3A0A0A6YYF3 556 aa5.43□□□□□ -1.54
TOPBP1-210ENST00000572787 RGSL1A5PLK6 1076 aa5.43□□□□□ -1.54
TOPBP1-210ENST00000572787 DCDC2CA8MYV0 355 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms