RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 ANKS3Q6ZW76 656 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 HS2ST1Q7LGA3 356 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 BRSK2Q8IWQ3 736 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 ADHFE1Q8IWW8 467 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 SUSD6Q92537 303 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 CCDC47Q96A33 483 aaKnown RBP22.41■■□□□ 1.18
CHMP6-204ENST00000572778 CCDC34Q96HJ3 373 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 SUSD3Q96L08 255 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 SFXN1Q9H9B4 322 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 AGPAT3Q9NRZ7 376 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 CDH22Q9UJ99 828 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 SYN3O14994 580 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 KIAA0391O15091 583 aaKnown RBP22.4■■□□□ 1.18
CHMP6-204ENST00000572778 CLIC2O15247 247 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 ADAM12O43184 909 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 WEE2P0C1S8 567 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 ZP2Q05996 745 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 CBX2Q14781 532 aaPredicted RBP22.4■■□□□ 1.18
CHMP6-204ENST00000572778 GJD3Q8N144 294 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 CD320Q9NPF0 282 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 HSPBP1Q9NZL4 362 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 CHMP5Q9NZZ3 219 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 MTRRQ9UBK8 725 aa22.4■■□□□ 1.18
CHMP6-204ENST00000572778 PPEF2O14830 753 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 OR1D2P34982 312 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 WNT7BP56706 349 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 TFAMQ00059 246 aaKnown RBP22.39■■□□□ 1.17
CHMP6-204ENST00000572778 KNOP1Q1ED39 458 aaKnown RBP22.39■■□□□ 1.17
CHMP6-204ENST00000572778 BMT2Q1RMZ1 405 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 VARS2Q5ST30 1063 aaKnown RBP22.39■■□□□ 1.17
CHMP6-204ENST00000572778 C9orf57Q5W0N0 161 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 DSTYKQ6XUX3 929 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 EFCAB13Q8IY85 973 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 FMR1NBQ8N0W7 255 aaPredicted RBP22.39■■□□□ 1.17
CHMP6-204ENST00000572778 KIAA0895Q8NCT3 520 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 KREMEN2Q8NCW0 462 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 RIPOR3Q96MK2 946 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 POP1Q99575 1024 aaKnown RBP22.39■■□□□ 1.17
CHMP6-204ENST00000572778 DPP3Q9NY33 737 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 CDY1Q9Y6F8 540 aa22.39■■□□□ 1.17
CHMP6-204ENST00000572778 CITO14578 2027 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 ZNF233A6NK53 670 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 C1RP00736 705 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 CYP2J2P51589 502 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 SNRPFP62306 86 aaKnown RBP22.38■■□□□ 1.17
CHMP6-204ENST00000572778 DPYDQ12882 1025 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 ATAT1Q5SQI0 421 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 LILRA6Q6PI73 481 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 NT5DC4Q86YG4 428 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 CBWD2Q8IUF1 395 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 RDH13Q8NBN7 331 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 APPL2Q8NEU8 664 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 HDAC7Q8WUI4 952 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 PHF7Q9BWX1 381 aaPredicted RBP22.38■■□□□ 1.17
CHMP6-204ENST00000572778 PLEKHA4Q9H4M7 779 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 PDE11AQ9HCR9 933 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 PCDHB8Q9UN66 801 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 BACE2Q9Y5Z0 518 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 TRIP11Q15643 1979 aa22.38■■□□□ 1.17
CHMP6-204ENST00000572778 H7C4K7 107 aa22.37■■□□□ 1.17
CHMP6-204ENST00000572778 MTHFRP42898 656 aa22.37■■□□□ 1.17
CHMP6-204ENST00000572778 RSPO2Q6UXX9 243 aaPredicted RBP22.37■■□□□ 1.17
CHMP6-204ENST00000572778 CACTINQ8WUQ7 758 aaKnown RBP22.37■■□□□ 1.17
CHMP6-204ENST00000572778 RPGRIP1Q96KN7 1286 aa22.37■■□□□ 1.17
CHMP6-204ENST00000572778 KIAA1586Q9HCI6 787 aa22.37■■□□□ 1.17
CHMP6-204ENST00000572778 CGNQ9P2M7 1197 aaKnown RBP22.37■■□□□ 1.17
CHMP6-204ENST00000572778 TIMM13Q9Y5L4 95 aaPredicted RBP22.37■■□□□ 1.17
CHMP6-204ENST00000572778 TCHHQ07283 1943 aa22.37■■□□□ 1.17
CHMP6-204ENST00000572778 CCDC195A0A1B0GUA6 201 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 ANO9A1A5B4 782 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 C19orf67A6NJJ6 358 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 PIRO00625 290 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 RFPL2O75678 378 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 ARPP19P56211 112 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 LILRA4P59901 499 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 FAM160A1Q05DH4 1040 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 SNW1Q13573 536 aaKnown RBP22.36■■□□□ 1.17
CHMP6-204ENST00000572778 RAB33AQ14088 237 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 CTXN3Q4LDR2 81 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 GPR149Q86SP6 731 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 XXYLT1Q8NBI6 393 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 ENGASEQ8NFI3 743 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 FEZF2Q8TBJ5 459 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 NECTIN4Q96NY8 510 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 POMKQ9H5K3 350 aa22.36■■□□□ 1.17
CHMP6-204ENST00000572778 M0QZQ0 153 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 SPTLC1O15269 473 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 RHOBTB3O94955 611 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 AARSP49588 968 aaKnown RBP eCLIP22.35■■□□□ 1.17
CHMP6-204ENST00000572778 SNRNP35Q16560 246 aaKnown RBP22.35■■□□□ 1.17
CHMP6-204ENST00000572778 LIN9Q5TKA1 542 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 ZNF280DQ6N043 979 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 USP37Q86T82 979 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 GOLGA5Q8TBA6 731 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 SENP8Q96LD8 212 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 FBXW11Q9UKB1 542 aa22.35■■□□□ 1.17
CHMP6-204ENST00000572778 TMEM191BP0C7N4 346 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 SP100P23497 879 aaPredicted RBP22.34■■□□□ 1.17
CHMP6-204ENST00000572778 PAX3P23760 479 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 YWHAHQ04917 246 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms