RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 MARCH5Q9NX47 278 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 COL4A4P53420 1690 aaPredicted RBP15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 VWA8A3KMH1 1905 aa15.66■□□□□ 0.1
NPLOC4-209ENST00000572760 TMEM189-UBE2V1I3L0A0 370 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 RFXAPO00287 272 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 PIRO00625 290 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 CSPG5O95196 566 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 GTF2H1P32780 548 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 CA8P35219 290 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 PNPLA4P41247 253 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 TAF6P49848 677 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 UBE3AQ05086 875 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 KIAA1841Q6NSI8 718 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 GPR153Q6NV75 609 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 FUT10Q6P4F1 479 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 LRSAM1Q6UWE0 723 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 DSTYKQ6XUX3 929 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 TMEM130Q8N3G9 435 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 ANKRD20A12PQ8NF67 263 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 SPPL3Q8TCT6 385 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 MICAL1Q8TDZ2 1067 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 POF1BQ8WVV4 589 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 ZNF516Q92618 1163 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 BPIFA3Q9BQP9 254 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 TTYH1Q9H313 450 aaPredicted RBP15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 TSPY26PQ9H489 355 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 PRDM12Q9H4Q4 367 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 SAMSN1Q9NSI8 373 aaKnown RBP15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 STK39Q9UEW8 545 aa15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 RANBP2P49792 3224 aaKnown RBP15.65■□□□□ 0.1
NPLOC4-209ENST00000572760 SF3B1O75533 1304 aaKnown RBP eCLIP15.65■□□□□ 0.12e-7■■■■□ 26.7
NPLOC4-209ENST00000572760 ANO9A1A5B4 782 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 F8W810 466 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 GRM6O15303 877 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 LPXNO60711 386 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 C4BPAP04003 597 aaKnown RBP15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 CDK11BP21127 795 aaKnown RBP15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 BRCC3P46736 316 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 MXI1P50539 228 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 MARSP56192 900 aaKnown RBP15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 TPM4P67936 248 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 CLDN10P78369 228 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 PPP3CAQ08209 521 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 MYO1EQ12965 1108 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 PTPROQ16827 1216 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 SV2CQ496J9 727 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 KRT39Q6A163 491 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 SV2AQ7L0J3 742 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 DDX53Q86TM3 631 aaKnown RBP15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 VPS52Q8N1B4 723 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 BCL7CQ8WUZ0 217 aaPredicted RBP15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 TMEM8AQ9HCN3 771 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 FANCLQ9NW38 375 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 LZTS1Q9Y250 596 aa15.64■□□□□ 0.09
NPLOC4-209ENST00000572760 ARHGEF37A1IGU5 675 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 EPOPA6NHQ4 379 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 KCNJ18B7U540 433 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 GOLGA6L19H0YKK7 550 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 PES1O00541 588 aaKnown RBP15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 PPEF2O14830 753 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 N4BP1O75113 896 aaKnown RBP15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 TPM2P07951 284 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 PAX3P23760 479 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 EEF1GP26641 437 aaKnown RBP15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 PIK3CAP42336 1068 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 FXR1P51114 621 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 LILRA4P59901 499 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 CETN1Q12798 172 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 NCOA4Q13772 614 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 KCNJ12Q14500 433 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 GRIN2CQ14957 1233 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 ZACNQ401N2 412 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 C1orf220Q5T0J3 134 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 FAM171A1Q5VUB5 890 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 TDRD10Q5VZ19 366 aaKnown RBP15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 TMC7Q7Z402 723 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 CEP57Q86XR8 500 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 TRIM59Q8IWR1 403 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 LRRC52Q8N7C0 313 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 CCDC150Q8NCX0 1101 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 C3orf58Q8NDZ4 430 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 SLC35C1Q96A29 364 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 HPDLQ96IR7 371 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 GAS2L1Q99501 681 aaPredicted RBP15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 IMPG2Q9BZV3 1241 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 LMAN2LQ9H0V9 348 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 ENTPD7Q9NQZ7 604 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 TLR9Q9NR96 1032 aa15.63■□□□□ 0.09
NPLOC4-209ENST00000572760 ATG2AQ2TAZ0 1938 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 PRRC2BQ5JSZ5 2229 aaKnown RBP15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 I3L4J1 428 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 CST3P01034 146 aaPredicted RBP15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 HLA-DRAP01903 254 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 AFPP02771 609 aaKnown RBP15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 SOD2P04179 222 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 URODP06132 367 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 IGFBP6P24592 240 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms