RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 RAB34Q9BZG1 259 aa10.8□□□□□ -0.68
TRAPPC1-205ENST00000572656 CHRDQ9H2X0 955 aa10.8□□□□□ -0.68
TRAPPC1-205ENST00000572656 KMT5AQ9NQR1 393 aa10.8□□□□□ -0.68
TRAPPC1-205ENST00000572656 AFF4Q9UHB7 1163 aaKnown RBP10.8□□□□□ -0.68
TRAPPC1-205ENST00000572656 DNM3Q9UQ16 869 aa10.8□□□□□ -0.68
TRAPPC1-205ENST00000572656 DNAH14Q0VDD8 3507 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 E9PMD0 336 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 NRG2O14511 850 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 TDGF1P13385 188 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 PSMC3P17980 439 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 MCM4P33991 863 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 EPHA5P54756 1037 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 NRLP54845 237 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 LMNB2Q03252 620 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 GNL2Q13823 731 aaKnown RBP10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 PPP2R5DQ14738 602 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 ZNF280DQ6N043 979 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 VITQ6UXI7 678 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 HS6ST3Q8IZP7 471 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 LEMD2Q8NC56 503 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 DDX12PQ92771 950 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 ZSWIM3Q96MP5 696 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 NTPCRQ9BSD7 190 aaKnown RBP10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 C17orf75Q9HAS0 396 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 TRPV4Q9HBA0 871 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 ZNF334Q9HCZ1 680 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 CEP72Q9P209 647 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 NOL7Q9UMY1 257 aaKnown RBP10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 NDRG2Q9UN36 371 aaKnown RBP10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 LIMCH1Q9UPQ0 1083 aa10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 MTCL1Q9Y4B5 1905 aaKnown RBP10.79□□□□□ -0.68
TRAPPC1-205ENST00000572656 OTOGLQ3ZCN5 2332 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 MEFVO15553 781 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 EIF5BO60841 1220 aaKnown RBP10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 MOSPD3O75425 235 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 TOM1L1O75674 476 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 TGM1P22735 817 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 MARCKSP29966 332 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 GDI1P31150 447 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 VIPR2P41587 438 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 ATXN1P54253 815 aaKnown RBP10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 MLLT6P55198 1093 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 HMGN5P82970 282 aaKnown RBP10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 TWF1Q12792 350 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 MAPK7Q13164 816 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 PTGDRQ13258 359 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 NBR1Q14596 966 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 SLC10A6Q3KNW5 377 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 KRT79Q5XKE5 535 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 RINT1Q6NUQ1 792 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 C1orf186Q6ZWK4 172 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 MFSD6LQ8IWD5 586 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 CCDC83Q8IWF9 413 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 ZSCAN18Q8TBC5 510 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 DEPDC1BQ8WUY9 529 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 FAM3CQ92520 227 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 ZBTB45Q96K62 511 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 TBC1D32Q96NH3 1257 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 RUSC1Q9BVN2 902 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 TIPINQ9BVW5 301 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 GPR88Q9GZN0 384 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 LMAN1LQ9HAT1 526 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 ASAH2Q9NR71 780 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 KCNG1Q9UIX4 513 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 GMEB2Q9UKD1 530 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 PCDHB8Q9UN66 801 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 PIAS3Q9Y6X2 628 aa10.78□□□□□ -0.68
TRAPPC1-205ENST00000572656 SFI1A8K8P3 1242 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 PP2D1A8MPX8 630 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 M0QZQ0 153 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 LAD1O00515 517 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 ZNF263O14978 683 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 SLC16A4O15374 487 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 OAZ2O95190 189 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 HARSP12081 509 aaKnown RBP10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 MYL4P12829 197 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 CPB1P15086 417 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 GUCY2CP25092 1073 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 U2AF2P26368 475 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 CCR3P51677 355 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 STRN3Q13033 797 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 NOLC1Q14978 699 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 RNF19BQ6ZMZ0 732 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 CELF5Q8N6W0 485 aaKnown RBP10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 BEST2Q8NFU1 509 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 SPIRE2Q8WWL2 714 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 E2F7Q96AV8 911 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 OXCT2Q9BYC2 517 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 PLEKHA5Q9HAU0 1116 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 CDV3Q9UKY7 258 aaKnown RBP10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 RAB23Q9ULC3 237 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 USP18Q9UMW8 372 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 GPR179Q6PRD1 2367 aa10.77□□□□□ -0.69
TRAPPC1-205ENST00000572656 HEPACAM2A8MVW5 462 aa10.76□□□□□ -0.69
TRAPPC1-205ENST00000572656 ARNTLO00327 626 aa10.76□□□□□ -0.69
TRAPPC1-205ENST00000572656 CLDN3O15551 220 aa10.76□□□□□ -0.69
TRAPPC1-205ENST00000572656 MAPTP10636 758 aaKnown RBP10.76□□□□□ -0.69
TRAPPC1-205ENST00000572656 CHRNB1P11230 501 aa10.76□□□□□ -0.69
TRAPPC1-205ENST00000572656 PLS3P13797 630 aa10.76□□□□□ -0.69
TRAPPC1-205ENST00000572656 GJA1P17302 382 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms