RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 CLSTN3Q9BQT9 956 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 MRPL44Q9H9J2 332 aaKnown RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 PLEKHA5Q9HAU0 1116 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 C11orf16Q9NQ32 467 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 TOPORSQ9NS56 1045 aaPredicted RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 FNIP2Q9P278 1114 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 MTRRQ9UBK8 725 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 KCNG1Q9UIX4 513 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 UBE4BO95155 1302 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 HELZP42694 1942 aaKnown RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 MYO10Q9HD67 2058 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 ANO9A1A5B4 782 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 FSD2A1L4K1 749 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 LOC730098B7Z3J9 87 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 M0QZQ0 153 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 DLL1O00548 723 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 GCNT3O95395 438 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 CXCL14O95715 111 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 URODP06132 367 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 IDEP14735 1019 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 ACOT2P49753 483 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 ASIC1P78348 528 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 POU5F1Q01860 360 aaKnown RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 DPYDQ12882 1025 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 STK4Q13043 487 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 ALCAMQ13740 583 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 AAK1Q2M2I8 961 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 HERC4Q5GLZ8 1057 aaPredicted RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 FAM26FQ5R3K3 315 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 SPATA1Q5VX52 437 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 JADE1Q6IE81 842 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 LLGL2Q6P1M3 1020 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 C12orf76Q8N812 135 aaPredicted RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 TTC13Q8NBP0 860 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 PLEKHO2Q8TD55 490 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 TMEM174Q8WUU8 243 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 BORCS6Q96GS4 357 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 UROC1Q96N76 676 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 FAM193BQ96PV7 902 aaPredicted RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 MSTO1Q9BUK6 570 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 RHOBTB2Q9BYZ6 727 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 SCAND2PQ9GZW5 306 aaPredicted RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 KCTD10Q9H3F6 313 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 ZHX3Q9H4I2 956 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 STK39Q9UEW8 545 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 PUF60Q9UHX1 559 aaKnown RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 FBXW11Q9UKB1 542 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 AGO2Q9UKV8 859 aaKnown RBP9.45□□□□□ -0.9
SMG6-210ENST00000572205 VPS13AQ96RL7 3174 aa9.45□□□□□ -0.9
SMG6-210ENST00000572205 ANAPC1Q9H1A4 1944 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 ZNF638Q14966 1978 aaKnown RBP9.44□□□□□ -0.9
SMG6-210ENST00000572205 PVALEFA0A1B0GWK0 134 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 PIRO00625 290 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 NRG2O14511 850 aaPredicted RBP9.44□□□□□ -0.9
SMG6-210ENST00000572205 C2CD2LO14523 706 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 TGM5O43548 720 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 N4BP1O75113 896 aaKnown RBP9.44□□□□□ -0.9
SMG6-210ENST00000572205 C1RP00736 705 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 CYP3A5P20815 502 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 GARTP22102 1010 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 ABCD1P33897 745 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 AFMP43652 599 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 BECN1Q14457 450 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 USP41Q3LFD5 358 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 ZCWPW2Q504Y3 356 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 FAM171A1Q5VUB5 890 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 SLC8B1Q6J4K2 584 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 KIAA1841Q6NSI8 718 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 POTEHQ6S545 545 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 ADHFE1Q8IWW8 467 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 C12orf56Q8IXR9 622 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 CCDC65Q8IXS2 484 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 FSIP1Q8NA03 581 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 TMEM87AQ8NBN3 555 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 CMASQ8NFW8 434 aaPredicted RBP9.44□□□□□ -0.9
SMG6-210ENST00000572205 SPATA20Q8TB22 786 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 RIN2Q8WYP3 895 aaPredicted RBP9.44□□□□□ -0.9
SMG6-210ENST00000572205 CASP10Q92851 521 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 PPP2R3CQ969Q6 453 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 SAAL1Q96ER3 474 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 BICD1Q96G01 975 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 SUSD3Q96L08 255 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 ACCSQ96QU6 501 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 RTP3Q9BQQ7 232 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 TTPALQ9BTX7 342 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 COLEC11Q9BWP8 271 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 POMKQ9H5K3 350 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 MAN1C1Q9NR34 630 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 MRPL17Q9NRX2 175 aaKnown RBP9.44□□□□□ -0.9
SMG6-210ENST00000572205 AGPAT3Q9NRZ7 376 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 PRKAG3Q9UGI9 489 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 SIX4Q9UIU6 781 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 C2CD2Q9Y426 696 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 MUC6Q6W4X9 2439 aa9.44□□□□□ -0.9
SMG6-210ENST00000572205 USP34Q70CQ2 3546 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 WDR27A2RRH5 827 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 POM121CA8CG34 1229 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 TNFRSF10AO00220 468 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms