RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 BRCC3P46736 316 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 VAMP7P51809 220 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 DLG4P78352 724 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 RBP5P82980 135 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 ELAVL2Q12926 359 aaKnown RBP11.1□□□□□ -0.63
LITAF-207ENST00000571459 BMS1Q14692 1282 aaKnown RBP11.1□□□□□ -0.63
LITAF-207ENST00000571459 FAM171A1Q5VUB5 890 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 SCARA3Q6AZY7 606 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 KIAA1841Q6NSI8 718 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 FUT10Q6P4F1 479 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 FOXR2Q6PJQ5 311 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 INTS8Q75QN2 995 aaKnown RBP11.1□□□□□ -0.63
LITAF-207ENST00000571459 USP37Q86T82 979 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 MICALL1Q8N3F8 863 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 C1orf127Q8N9H9 656 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 AUTS2Q8WXX7 1259 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 BORCS6Q96GS4 357 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 B3GALT6Q96L58 329 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 CEP63Q96MT8 703 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 MED15Q96RN5 788 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 TCF25Q9BQ70 676 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 MKNK1Q9BUB5 465 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 ENTPD7Q9NQZ7 604 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 ANO10Q9NW15 660 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
LITAF-207ENST00000571459 R3HCC1Q9Y3T6 440 aaKnown RBP11.1□□□□□ -0.63
LITAF-207ENST00000571459 ATG2AQ2TAZ0 1938 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 EYSQ5T1H1 3165 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 LRRIQ3A6PVS8 624 aaPredicted RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 C2CD2LO14523 706 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 IKBKBO14920 756 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 SLC16A3O15427 465 aaKnown RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 PHACTR2O75167 634 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 SOD2P04179 222 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 TRIM49P0CI25 452 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 TRIM49CP0CI26 452 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 CTSAP10619 480 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 ERCC5P28715 1186 aaPredicted RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 POLR2BP30876 1174 aaKnown RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 LILRA4P59901 499 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 CLDN10P78369 228 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 TYRO3Q06418 890 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 CCDC85BQ15834 202 aaPredicted RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 STX1AQ16623 288 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 TPD52L1Q16890 204 aaPredicted RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 USP41Q3LFD5 358 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 CCDC40Q4G0X9 1142 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 C1orf220Q5T0J3 134 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 PLPP4Q5VZY2 271 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 PDE12Q6L8Q7 609 aaKnown RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 TRAPPC11Q7Z392 1133 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 FILIP1Q7Z7B0 1213 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 CEP57Q86XR8 500 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 CREBRFQ8IUR6 639 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 RNF168Q8IYW5 571 aaPredicted RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 MRPL43Q8N983 215 aaKnown RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 HERC2P3Q9BVR0 1158 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 ZBP1Q9H171 429 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 NGRNQ9NPE2 291 aaKnown RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 STK39Q9UEW8 545 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 ARMCX3Q9UH62 379 aaPredicted RBP11.09□□□□□ -0.63
LITAF-207ENST00000571459 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 VWA8A3KMH1 1905 aa11.09□□□□□ -0.63
LITAF-207ENST00000571459 SYCE3A1L190 88 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 HIDE1A8MVS5 230 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 FSCN2O14926 492 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 SPTLC1O15269 473 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 LETM1O95202 739 aaPredicted RBP11.08□□□□□ -0.64
LITAF-207ENST00000571459 FGFR1OPO95684 399 aaKnown RBP11.08□□□□□ -0.64
LITAF-207ENST00000571459 URODP06132 367 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 GCLMP48507 274 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 GLUD2P49448 558 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 AP3M2P53677 418 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 ENPEPQ07075 957 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 BFSP1Q12934 665 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 BIRC3Q13489 604 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 SMC1AQ14683 1233 aaKnown RBP11.08□□□□□ -0.64
LITAF-207ENST00000571459 CT47A1Q5JQC4 288 aaPredicted RBP11.08□□□□□ -0.64
LITAF-207ENST00000571459 KIAA0319Q5VV43 1072 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 TCERG1LQ5VWI1 586 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 DSTYKQ6XUX3 929 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 FRMD5Q7Z6J6 570 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 ADGRD2Q7Z7M1 963 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 CXorf38Q8TB03 319 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 PPM1EQ8WY54 764 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 RIN2Q8WYP3 895 aaPredicted RBP11.08□□□□□ -0.64
LITAF-207ENST00000571459 TTPALQ9BTX7 342 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 NSUN3Q9H649 340 aaKnown RBP11.08□□□□□ -0.64
LITAF-207ENST00000571459 TLE6Q9H808 572 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 MMRN2Q9H8L6 949 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 MRPL17Q9NRX2 175 aaKnown RBP11.08□□□□□ -0.64
LITAF-207ENST00000571459 CHST7Q9NS84 486 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 COL6A3P12111 3177 aa11.08□□□□□ -0.64
LITAF-207ENST00000571459 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.07□□□□□ -0.64
LITAF-207ENST00000571459 C2orf71A6NGG8 1288 aa11.07□□□□□ -0.64
LITAF-207ENST00000571459 KPNA7A9QM74 516 aa11.07□□□□□ -0.64
LITAF-207ENST00000571459 PER2O15055 1255 aa11.07□□□□□ -0.64
LITAF-207ENST00000571459 GNA14O95837 355 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms