RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 HOOK1Q9UJC3 728 aaKnown RBP14.52□□□□□ -0.09
CCDC40-205ENST00000571028 FBXO4Q9UKT5 387 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 HES2Q9Y543 173 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 PCDHB2Q9Y5E7 798 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 PCDHGA2Q9Y5H1 932 aa14.52□□□□□ -0.09
CCDC40-205ENST00000571028 CNTNAP2Q9UHC6 1331 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 FRMD3A2A2Y4 597 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 N4BP3O15049 544 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 SOD2P04179 222 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 LAMP2P13473 410 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 OSTNP61366 133 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 CSTF1Q05048 431 aaKnown RBP14.51□□□□□ -0.09
CCDC40-205ENST00000571028 KCNA1Q09470 495 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 UBXN2BQ14CS0 331 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 PCBP1Q15365 356 aaKnown RBP eCLIP14.51□□□□□ -0.09
CCDC40-205ENST00000571028 ZNF568Q3ZCX4 644 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 CNNM4Q6P4Q7 775 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 SLC27A1Q6PCB7 646 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 ZNF280BQ86YH2 543 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 TIGD1Q96MW7 591 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 ACCSQ96QU6 501 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 RPS6KC1Q96S38 1066 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 ACO2Q99798 780 aaKnown RBP14.51□□□□□ -0.09
CCDC40-205ENST00000571028 ADPGKQ9BRR6 497 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 TMEM175Q9BSA9 504 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 RTKNQ9BST9 563 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 KANSL3Q9P2N6 904 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 PARP2Q9UGN5 583 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 SMG5Q9UPR3 1016 aaKnown RBP14.51□□□□□ -0.09
CCDC40-205ENST00000571028 PCDHB13Q9Y5F0 798 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 NUMBLQ9Y6R0 609 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 KMT2BQ9UMN6 2715 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-205ENST00000571028 CEP250Q9BV73 2442 aa14.51□□□□□ -0.09
CCDC40-205ENST00000571028 A0A1B0GUA9 196 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 KANSL1LA0AUZ9 987 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 DCDC2BA2VCK2 349 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 MEIS3P2A8K0S8 358 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 TISP43B9A030 160 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 TEX28O15482 410 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 MYL1P05976 194 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 ITGA4P13612 1032 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 GLUD2P49448 558 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 GTF2BQ00403 316 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 HTR4Q13639 388 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 SEZ6Q53EL9 994 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 L1TD1Q5T7N2 865 aaKnown RBP14.5□□□□□ -0.09
CCDC40-205ENST00000571028 STXBP4Q6ZWJ1 553 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 NOC3LQ8WTT2 800 aaKnown RBP14.5□□□□□ -0.09
CCDC40-205ENST00000571028 SMARCE1Q969G3 411 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 HERC2P3Q9BVR0 1158 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 NXF3Q9H4D5 531 aaKnown RBP14.5□□□□□ -0.09
CCDC40-205ENST00000571028 RSAD1Q9HA92 442 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 OLFML3Q9NRN5 406 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 GMEB2Q9UKD1 530 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 EXOC7Q9UPT5 735 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 TNFSF13BQ9Y275 285 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 PRG3Q9Y2Y8 225 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-205ENST00000571028 IPPQ9Y573 584 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 PCDHA5Q9Y5H7 936 aa14.5□□□□□ -0.09
CCDC40-205ENST00000571028 ANKRD63C9JTQ0 380 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 BIN1O00499 593 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 NRP1O14786 923 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 HNRNPDLO14979 420 aaKnown RBP14.49□□□□□ -0.09
CCDC40-205ENST00000571028 LILRB3O75022 631 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 ZNF623O75123 536 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 LRRN2O75325 713 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 SMC2O95347 1197 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 SPATA31D3P0C874 917 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 GLULP15104 373 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 AKAP5P24588 427 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 MCM4P33991 863 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 STARD6P59095 220 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 STK4Q13043 487 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 SPATA31D4Q6ZUB0 917 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 MAML2Q8IZL2 1156 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-205ENST00000571028 SMG8Q8ND04 991 aaKnown RBP14.49□□□□□ -0.09
CCDC40-205ENST00000571028 ST13P5Q8NFI4 369 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-205ENST00000571028 HDAC7Q8WUI4 952 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 CCDC51Q96ER9 411 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 CDT1Q9H211 546 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 PLEKHA4Q9H4M7 779 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 ZSCAN32Q9NX65 697 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 ZDHHC7Q9NXF8 308 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 KLK14Q9P0G3 267 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 MAPK8IP1Q9UQF2 711 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 GDAQ9Y2T3 454 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 ZFP37Q9Y6Q3 630 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-205ENST00000571028 OTOGLQ3ZCN5 2332 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 ZFHX4Q86UP3 3567 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 MYH11P35749 1972 aa14.49□□□□□ -0.09
CCDC40-205ENST00000571028 ACACBO00763 2458 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 ANHXE9PGG2 379 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 B4GALT3O60512 393 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 DDHD2O94830 711 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 POMCP01189 267 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 FSHRP23945 695 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 MAGEA9P43362 315 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 OR1G1P47890 313 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 PRKCQQ04759 706 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms